RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SERF2P84101 59 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 TMEM41BQ5BJD5 291 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 GCSAMLQ5JQS6 135 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 MIC13Q5XKP0 118 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 PIFOQ8TCI5 191 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 ACY3Q96HD9 319 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 GGTLC1Q9BX51 225 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 MRPL36Q9P0J6 103 aaKnown RBP17.51■□□□□ 0.39
VSX1-205ENST00000429762 LSM4Q9Y4Z0 139 aaKnown RBP17.51■□□□□ 0.39
VSX1-205ENST00000429762 DMRT1Q9Y5R6 373 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 ATP5IP56385 69 aaPredicted RBP17.51■□□□□ 0.39
VSX1-205ENST00000429762 CIARTQ8N365 385 aaPredicted RBP17.51■□□□□ 0.39
VSX1-205ENST00000429762 LYPD6BQ8NI32 183 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 C17orf112F2Z3M2 114 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 H2AFB1P0C5Y9 115 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 SPSB3Q6PJ21 355 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 PRSS57Q6UWY2 283 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 MRPL41Q8IXM3 137 aaKnown RBP17.5■□□□□ 0.39
VSX1-205ENST00000429762 SFT2D1Q8WV19 159 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 C22orf15Q8WYQ4 148 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 ARPC1AQ92747 370 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 LINC00052Q96N35 136 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 SSX3Q99909 188 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 HSPB9Q9BQS6 159 aa17.5■□□□□ 0.39
VSX1-205ENST00000429762 IGKV1OR2-108A0A075B7D4 117 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 LY6EQ16553 131 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 TEPPQ6URK8 271 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 IL34Q6ZMJ4 242 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 BPIFCQ8NFQ6 507 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 RCC1LQ96I51 464 aaKnown RBP17.49■□□□□ 0.39
VSX1-205ENST00000429762 F11RQ9Y624 299 aaKnown RBP17.49■□□□□ 0.39
VSX1-205ENST00000429762 HMGB3O15347 200 aaKnown RBP17.49■□□□□ 0.39
VSX1-205ENST00000429762 FGF8P55075 233 aaPredicted RBP17.49■□□□□ 0.39
VSX1-205ENST00000429762 LCN15Q6UWW0 184 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 BCL6BQ8N143 479 aaPredicted RBP17.49■□□□□ 0.39
VSX1-205ENST00000429762 EIF4E3Q8N5X7 224 aaKnown RBP17.49■□□□□ 0.39
VSX1-205ENST00000429762 ZNF114Q8NC26 417 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 RNASEH2CQ8TDP1 164 aaKnown RBP17.49■□□□□ 0.39
VSX1-205ENST00000429762 SLC35E1Q96K37 410 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 RASL11BQ9BPW5 248 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 MEGF9Q9H1U4 602 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 SLC25A22Q9H936 323 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 C1RLQ9NZP8 487 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 PXMP4Q9Y6I8 212 aa17.49■□□□□ 0.39
VSX1-205ENST00000429762 IGHV7-81A0A0B4J1V7 117 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 SMAD7O15105 426 aaKnown RBP17.48■□□□□ 0.39
VSX1-205ENST00000429762 ASPHD1Q5U4P2 390 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 FAM122CQ6P4D5 195 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 ZNF562Q6V9R5 426 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 RPP25LQ8N5L8 163 aaKnown RBP17.48■□□□□ 0.39
VSX1-205ENST00000429762 WNT10AQ9GZT5 417 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 PDZD2O15018 2839 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 RAB19A4D1S5 217 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 MPDU1O75352 247 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 YIF1AO95070 293 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 DPPA3Q6W0C5 159 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 OR10G4Q8NGN3 311 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 OR10G9Q8NGN4 311 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 OR10G7Q8NGN6 311 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 OR1P1Q8NH06 330 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 NARS2Q96I59 477 aaKnown RBP17.48■□□□□ 0.39
VSX1-205ENST00000429762 SLC25A33Q9BSK2 321 aa17.48■□□□□ 0.39
VSX1-205ENST00000429762 H3BUX3 64 aa17.47■□□□□ 0.39
VSX1-205ENST00000429762 GATA2P23769 480 aaPredicted RBP17.47■□□□□ 0.39
VSX1-205ENST00000429762 TMEM144Q7Z5S9 345 aa17.47■□□□□ 0.39
VSX1-205ENST00000429762 FNDC10F2Z333 226 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 J3QLI3 93 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 OR10J1P30954 320 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 GPX4P36969 197 aaPredicted RBP17.46■□□□□ 0.39
VSX1-205ENST00000429762 NPIPB3Q92617 1050 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 TREM1Q9NP99 234 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 ZNF469Q96JG9 3925 aaPredicted RBP17.46■□□□□ 0.39
VSX1-205ENST00000429762 FBP1P09467 338 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 EGR2P11161 476 aaPredicted RBP17.46■□□□□ 0.39
VSX1-205ENST00000429762 CTRB1P17538 263 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 PVRIGQ6DKI7 326 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 CTRB2Q6GPI1 263 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 STPG3Q8N7X2 389 aa17.46■□□□□ 0.39
VSX1-205ENST00000429762 LINC01548A6NM66 108 aa17.45■□□□□ 0.38
VSX1-205ENST00000429762 RND2P52198 227 aa17.45■□□□□ 0.38
VSX1-205ENST00000429762 C5orf56Q8N8D9 126 aa17.45■□□□□ 0.38
VSX1-205ENST00000429762 LFNGQ8NES3 379 aa17.45■□□□□ 0.38
VSX1-205ENST00000429762 CACNG8Q8WXS5 425 aa17.45■□□□□ 0.38
VSX1-205ENST00000429762 CSPG4Q6UVK1 2322 aa17.45■□□□□ 0.38
VSX1-205ENST00000429762 C9JQL5 133 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 MT-CO2P00403 227 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 HLA-DRB1P01911 266 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 B2MP61769 119 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 RBM14Q96PK6 669 aaKnown RBP17.44■□□□□ 0.38
VSX1-205ENST00000429762 MAP1LC3B2A6NCE7 125 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 NUDT19A8MXV4 375 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 M6PRP20645 277 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 DEFA5Q01523 94 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 ACOT6Q3I5F7 207 aaPredicted RBP17.44■□□□□ 0.38
VSX1-205ENST00000429762 OR5T1Q8NG75 326 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 SRSF8Q9BRL6 282 aaKnown RBP17.44■□□□□ 0.38
VSX1-205ENST00000429762 MAP1LC3BQ9GZQ8 125 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 SLC45A2Q9UMX9 530 aa17.44■□□□□ 0.38
VSX1-205ENST00000429762 GUK1Q16774 197 aa17.43■□□□□ 0.38
VSX1-205ENST00000429762 DEFB112Q30KQ8 113 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms