RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 MRPL32Q9BYC8 188 aaKnown RBP11.09□□□□□ -0.63
THBS3-202ENST00000428962 GAR1Q9NY12 217 aaKnown RBP11.09□□□□□ -0.63
THBS3-202ENST00000428962 MGAQ8IWI9 3026 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 A0A1W2PPQ1 181 aa11.08□□□□□ -0.64
THBS3-202ENST00000428962 GATCO43716 136 aaKnown RBP11.08□□□□□ -0.64
THBS3-202ENST00000428962 IGLV2-23P01705 113 aa11.08□□□□□ -0.64
THBS3-202ENST00000428962 RBP4P02753 201 aa11.08□□□□□ -0.64
THBS3-202ENST00000428962 OR5G3P0C626 314 aa11.08□□□□□ -0.64
THBS3-202ENST00000428962 PPOXP50336 477 aa11.08□□□□□ -0.64
THBS3-202ENST00000428962 LCN2P80188 198 aa11.08□□□□□ -0.64
THBS3-202ENST00000428962 ZNF672Q499Z4 452 aaPredicted RBP11.08□□□□□ -0.64
THBS3-202ENST00000428962 ZNF600Q6ZNG1 722 aa11.08□□□□□ -0.64
THBS3-202ENST00000428962 OR5T1Q8NG75 326 aa11.08□□□□□ -0.64
THBS3-202ENST00000428962 PHOX2AO14813 284 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 ACTL6BO94805 426 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 PLAUP00749 431 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 TYMSP04818 313 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 DIAPH2-AS1Q14236 149 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 FAM209BQ5JX69 171 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 MIR17HGQ75NE6 70 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 DERL1Q9BUN8 251 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 ZNF430Q9H8G1 570 aaPredicted RBP11.07□□□□□ -0.64
THBS3-202ENST00000428962 LY96Q9Y6Y9 160 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 IGSF10Q6WRI0 2623 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 IGKV1OR2-108A0A075B7D4 117 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 IGHV2-26A0A0B4J1V2 119 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 C9JCJ5 164 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 IGHV2-70P01814 119 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 PRB1P04280 392 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 LY6DQ14210 128 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 PSG5Q15238 335 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 MOB3BQ86TA1 216 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 TEX45Q8NA69 505 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 SFRP2Q96HF1 295 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 ELOVL1Q9BW60 279 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 NIT2Q9NQR4 276 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 PITPNC1Q9UKF7 332 aa11.07□□□□□ -0.64
THBS3-202ENST00000428962 AMMECR1Q9Y4X0 333 aaPredicted RBP11.07□□□□□ -0.64
THBS3-202ENST00000428962 SLC25A17O43808 307 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 FOXH1O75593 365 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 FABP1P07148 127 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 ETFRF1Q6IPR1 90 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 HIST3H2BBQ8N257 126 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 C11orf42Q8N5U0 333 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 OR4X1Q8NH49 305 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 ACY3Q96HD9 319 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 PFDN5Q99471 154 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 CLEC7AQ9BXN2 247 aa11.06□□□□□ -0.64
THBS3-202ENST00000428962 ENSAO43768 121 aaKnown RBP11.05□□□□□ -0.64
THBS3-202ENST00000428962 OR7C2O60412 319 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 WT1-ASQ06250 92 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 SSX2Q16385 188 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 C4orf17Q53FE4 359 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 MMD2Q8IY49 270 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 BEND2Q8NDZ0 799 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 OR8B3Q8NGG8 313 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 OR1L4Q8NGR5 311 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 OR8B2Q96RD0 313 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 CGB1A6NKQ9 187 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 IFITM10A6NMD0 228 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 C8orf88P0DMB2 117 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 SFTPCP11686 197 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 BPIFB3P59826 476 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 SELENOTP62341 195 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 FOXL1Q12952 345 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 ZNF841Q6ZN19 808 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 MIOXQ9UGB7 285 aa11.05□□□□□ -0.64
THBS3-202ENST00000428962 ARFGEF3Q5TH69 2177 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 TRBV20OR9-2A0A075B6H5 130 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 PPIAL4CA0A0B4J2A2 164 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 IGLV1-47P01700 117 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 PPIAL4GP0DN37 164 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 COL8A2P25067 703 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 ACTL10Q5JWF8 245 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 C10orf55Q5SWW7 151 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 ZNF843Q8N446 348 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 ZNF114Q8NC26 417 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 OR10G8Q8NGN5 311 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 C8orf46Q8TAG6 207 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 RAB1BQ9H0U4 201 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 OR51M1Q9H341 326 aa11.04□□□□□ -0.64
THBS3-202ENST00000428962 A0A1W2PPI3 338 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 TCRBV4S1A1TA0A5B7 111 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 LINC00587B1AMM8 73 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 E7EUB6 86 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 BUB1B-PAK6H3BSN5 160 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 SIAH2O43255 324 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 COX7A2P2O60397 106 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 SOD3P08294 240 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 MLANAQ16655 118 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 TEX38Q6PEX7 206 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 THAP8Q8NA92 274 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 OR2T6Q8NHC8 308 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 C22orf15Q8WYQ4 148 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 TIMD4Q96H15 378 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 SLC25A33Q9BSK2 321 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 DNAJC4Q9NNZ3 241 aa11.03□□□□□ -0.64
THBS3-202ENST00000428962 INSIG2Q9Y5U4 225 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms