RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 ERHP84090 104 aaKnown RBP7.12□□□□□ -1.27
TRIM39-208ENST00000428555 PRCDQ00LT1 54 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 TRIM16LQ309B1 348 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 Q56UQ5 140 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 BTNL8Q6UX41 500 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 Q6ZRM9 215 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 TMEM61Q8N0U2 210 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 OR51S1Q8NGJ8 323 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 OR4C16Q8NGL9 310 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 MCFD2Q8NI22 146 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 GLYATL2Q8WU03 294 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 BSCL2Q96G97 398 aaPredicted RBP7.12□□□□□ -1.27
TRIM39-208ENST00000428555 TM2D3Q9BRN9 247 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 ZNF436Q9C0F3 470 aaPredicted RBP7.12□□□□□ -1.27
TRIM39-208ENST00000428555 NXF2Q9GZY0 626 aaKnown RBP7.12□□□□□ -1.27
TRIM39-208ENST00000428555 C5orf66Q9H5L9 145 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 SLC2A8Q9NY64 477 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 MRPL27Q9P0M9 148 aaKnown RBP7.12□□□□□ -1.27
TRIM39-208ENST00000428555 RSL24D1Q9UHA3 163 aaKnown RBP7.12□□□□□ -1.27
TRIM39-208ENST00000428555 GPR132Q9UNW8 380 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 UFC1Q9Y3C8 167 aa7.12□□□□□ -1.27
TRIM39-208ENST00000428555 RYR3Q15413 4870 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 IGHV3OR16-8A0A075B7F1 116 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 A0A0G2JRQ6 117 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 TEX13DA0A0J9YY54 714 aaPredicted RBP7.11□□□□□ -1.27
TRIM39-208ENST00000428555 ANKRD20A5PA0PJZ0 165 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 OR11H12B2RN74 326 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 ST8SIA3O43173 380 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 ZNF207O43670 478 aaKnown RBP7.11□□□□□ -1.27
TRIM39-208ENST00000428555 CDS2O95674 445 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 MT-CO2P00403 227 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 OR5AC1P0C628 307 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 UCP1P25874 307 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 SNCAP37840 140 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 MFAP4P55083 255 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 ELLP55199 621 aaPredicted RBP7.11□□□□□ -1.27
TRIM39-208ENST00000428555 ANKRD39Q53RE8 183 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 SPSB3Q6PJ21 355 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 LINC00322Q6ZN03 302 aaPredicted RBP7.11□□□□□ -1.27
TRIM39-208ENST00000428555 MARC2Q969Z3 335 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 PINX1Q96BK5 328 aaKnown RBP7.11□□□□□ -1.27
TRIM39-208ENST00000428555 RRNAD1Q96FB5 475 aaKnown RBP7.11□□□□□ -1.27
TRIM39-208ENST00000428555 ATP6V0BQ99437 205 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 C20orf24Q9BUV8 137 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 TMEM222Q9H0R3 208 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 WFDC10AQ9H1F0 79 aa7.11□□□□□ -1.27
TRIM39-208ENST00000428555 C14orf166Q9Y224 244 aaKnown RBP7.11□□□□□ -1.27
TRIM39-208ENST00000428555 RBMY1BA6NDE4 496 aaKnown RBP7.1□□□□□ -1.27
TRIM39-208ENST00000428555 RBMY1EA6NEQ0 496 aaKnown RBP7.1□□□□□ -1.27
TRIM39-208ENST00000428555 CCDC160A6NGH7 325 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 NDUFA4O00483 81 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 RBMY1DP0C7P1 496 aaKnown RBP7.1□□□□□ -1.27
TRIM39-208ENST00000428555 SURF2Q15527 256 aaPredicted RBP7.1□□□□□ -1.27
TRIM39-208ENST00000428555 MLANAQ16655 118 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 RBPMS2Q6ZRY4 209 aaKnown RBP7.1□□□□□ -1.27
TRIM39-208ENST00000428555 SELENOHQ8IZQ5 122 aaKnown RBP7.1□□□□□ -1.27
TRIM39-208ENST00000428555 SLC35G3Q8N808 338 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 ZNF114Q8NC26 417 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 OR52B4Q8NGK2 314 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 RNASE11Q8TAA1 199 aaKnown RBP7.1□□□□□ -1.27
TRIM39-208ENST00000428555 LHFPL5Q8TAF8 219 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 TMEM190Q8WZ59 177 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 ZNF414Q96IQ9 312 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 TXN2Q99757 166 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 PRRT1Q99946 306 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 NAA60Q9H7X0 242 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 DNAH7Q8WXX0 4024 aa7.1□□□□□ -1.27
TRIM39-208ENST00000428555 TRAV25A0A0B4J276 109 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 LINC00854A0A1B0GVQ3 168 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 CRYM-AS1A6NIL9 109 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 C3orf84H3BNL1 204 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 K7EMT4 169 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 NUPL2O15504 423 aaKnown RBP7.09□□□□□ -1.27
TRIM39-208ENST00000428555 YIF1AO95070 293 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 FCGR2BP31994 310 aaPredicted RBP7.09□□□□□ -1.27
TRIM39-208ENST00000428555 DHODHQ02127 395 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 PYDC2Q56P42 97 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 SLC16A13Q7RTY0 426 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 GPR146Q96CH1 333 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 SPATA25Q9BR10 227 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 PDCD10Q9BUL8 212 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 WDR12Q9GZL7 423 aaKnown RBP7.09□□□□□ -1.27
TRIM39-208ENST00000428555 SRD5A3Q9H8P0 318 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 DAZ1Q9NQZ3 744 aaKnown RBP7.09□□□□□ -1.27
TRIM39-208ENST00000428555 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.09□□□□□ -1.27
TRIM39-208ENST00000428555 MCUBQ9NWR8 336 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 GAR1Q9NY12 217 aaKnown RBP7.09□□□□□ -1.27
TRIM39-208ENST00000428555 SMPXQ9UHP9 88 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 SCP2D1Q9UJQ7 156 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 KCNIP3Q9Y2W7 256 aa7.09□□□□□ -1.27
TRIM39-208ENST00000428555 INS-IGF2F8WCM5 200 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 GNG7O60262 68 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 TMEM50AO95807 157 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 RNASE2P10153 161 aaKnown RBP7.08□□□□□ -1.28
TRIM39-208ENST00000428555 AKR1C4P17516 323 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 HOXA1P49639 335 aaPredicted RBP7.08□□□□□ -1.28
TRIM39-208ENST00000428555 SUB1P53999 127 aaKnown RBP eCLIP7.08□□□□□ -1.28
TRIM39-208ENST00000428555 SPCS3P61009 180 aa7.08□□□□□ -1.28
TRIM39-208ENST00000428555 RELQ04864 619 aaPredicted RBP7.08□□□□□ -1.28
TRIM39-208ENST00000428555 ANKRD55Q3KP44 614 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms