RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 STARD9Q9P2P6 4700 aa13.73□□□□□ -0.21
PSPC1-202ENST00000427943 LOC102724200A0A096LPH7 203 aaPredicted RBP13.72□□□□□ -0.21
PSPC1-202ENST00000427943 A0A0B4J293 547 aa13.72□□□□□ -0.21
PSPC1-202ENST00000427943 A0A0G2JRQ6 117 aa13.72□□□□□ -0.21
PSPC1-202ENST00000427943 TSPAN4O14817 238 aa13.72□□□□□ -0.21
PSPC1-202ENST00000427943 CTSDP07339 412 aaPredicted RBP13.72□□□□□ -0.21
PSPC1-202ENST00000427943 MRPS10P82664 201 aaKnown RBP13.72□□□□□ -0.21
PSPC1-202ENST00000427943 RELQ04864 619 aaPredicted RBP13.72□□□□□ -0.21
PSPC1-202ENST00000427943 IL18Q14116 193 aa13.72□□□□□ -0.21
PSPC1-202ENST00000427943 RNASE11Q8TAA1 199 aaKnown RBP13.72□□□□□ -0.21
PSPC1-202ENST00000427943 DYNC2LI1Q8TCX1 351 aa13.72□□□□□ -0.21
PSPC1-202ENST00000427943 RAB2BQ8WUD1 216 aa13.72□□□□□ -0.21
PSPC1-202ENST00000427943 SMIM4Q8WVI0 70 aa13.72□□□□□ -0.21
PSPC1-202ENST00000427943 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 C15orf62A8K5M9 175 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 K7EMT4 169 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 GNG7O60262 68 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 ATG12O94817 140 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 YIF1AO95070 293 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 IFNA17P01571 189 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 UCP1P25874 307 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 SSBP1Q04837 148 aaKnown RBP13.71□□□□□ -0.21
PSPC1-202ENST00000427943 OR4C16Q8NGL9 310 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 DIRAS2Q96HU8 199 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 PDCD10Q9BUL8 212 aa13.71□□□□□ -0.21
PSPC1-202ENST00000427943 CCDC59Q9P031 241 aaKnown RBP13.71□□□□□ -0.21
PSPC1-202ENST00000427943 DYNC2H1Q8NCM8 4307 aaKnown RBP13.7□□□□□ -0.22
PSPC1-202ENST00000427943 OR5AC1P0C628 307 aa13.7□□□□□ -0.22
PSPC1-202ENST00000427943 FCGR2BP31994 310 aaPredicted RBP13.7□□□□□ -0.22
PSPC1-202ENST00000427943 SNCAP37840 140 aa13.7□□□□□ -0.22
PSPC1-202ENST00000427943 HOXA1P49639 335 aaPredicted RBP13.7□□□□□ -0.22
PSPC1-202ENST00000427943 MEF2DQ14814 521 aa13.7□□□□□ -0.22
PSPC1-202ENST00000427943 LAMTOR1Q6IAA8 161 aa13.7□□□□□ -0.22
PSPC1-202ENST00000427943 TXN2Q99757 166 aa13.7□□□□□ -0.22
PSPC1-202ENST00000427943 C6orf62Q9GZU0 229 aaPredicted RBP13.7□□□□□ -0.22
PSPC1-202ENST00000427943 NXF2Q9GZY0 626 aaKnown RBP13.7□□□□□ -0.22
PSPC1-202ENST00000427943 C14orf166Q9Y224 244 aaKnown RBP13.7□□□□□ -0.22
PSPC1-202ENST00000427943 IGHV7-4-1A0A0J9YVY3 117 aa13.69□□□□□ -0.22
PSPC1-202ENST00000427943 DISC1C4P0D8 188 aa13.69□□□□□ -0.22
PSPC1-202ENST00000427943 AKAIN1P0CW23 69 aa13.69□□□□□ -0.22
PSPC1-202ENST00000427943 ETV6P41212 452 aa13.69□□□□□ -0.22
PSPC1-202ENST00000427943 TMBIM6P55061 237 aa13.69□□□□□ -0.22
PSPC1-202ENST00000427943 ODF3L2Q3SX64 289 aa13.69□□□□□ -0.22
PSPC1-202ENST00000427943 LHFPL5Q8TAF8 219 aa13.69□□□□□ -0.22
PSPC1-202ENST00000427943 RRNAD1Q96FB5 475 aaKnown RBP13.69□□□□□ -0.22
PSPC1-202ENST00000427943 RNF2Q99496 336 aa13.69□□□□□ -0.22
PSPC1-202ENST00000427943 RTBDNQ9BSG5 229 aaPredicted RBP13.69□□□□□ -0.22
PSPC1-202ENST00000427943 SMPXQ9UHP9 88 aa13.69□□□□□ -0.22
PSPC1-202ENST00000427943 LYSTQ99698 3801 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 IGHV3OR16-13A0A075B7E8 117 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 IGHV3-74A0A0B4J1X5 117 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 TEX13DA0A0J9YY54 714 aaPredicted RBP13.68□□□□□ -0.22
PSPC1-202ENST00000427943 LCE6AA0A183 80 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 CHEK1O14757 476 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 RNASE2P10153 161 aaKnown RBP13.68□□□□□ -0.22
PSPC1-202ENST00000427943 TMEM116Q8NCL8 245 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 OR10C1Q96KK4 312 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 RHPN1-AS1Q9BWJ2 59 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 TMEM222Q9H0R3 208 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 NAA60Q9H7X0 242 aa13.68□□□□□ -0.22
PSPC1-202ENST00000427943 IGKV3-7A0A075B6H7 116 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 OR4C46A6NHA9 309 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 INS-IGF2F8WCM5 200 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 CTDSPLO15194 276 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 NOL3O60936 208 aaKnown RBP13.67□□□□□ -0.22
PSPC1-202ENST00000427943 TFPI2P48307 235 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 Q6ZRM9 215 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 DUSP18Q8NEJ0 188 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 BCL7BQ9BQE9 202 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 ENY2Q9NPA8 101 aa13.67□□□□□ -0.22
PSPC1-202ENST00000427943 H3BMQ9 156 aa13.66□□□□□ -0.22
PSPC1-202ENST00000427943 B3GALNT1O75752 331 aa13.66□□□□□ -0.22
PSPC1-202ENST00000427943 CDS2O95674 445 aa13.66□□□□□ -0.22
PSPC1-202ENST00000427943 NPBWR1P48145 328 aa13.66□□□□□ -0.22
PSPC1-202ENST00000427943 SURF2Q15527 256 aaPredicted RBP13.66□□□□□ -0.22
PSPC1-202ENST00000427943 OR51S1Q8NGJ8 323 aa13.66□□□□□ -0.22
PSPC1-202ENST00000427943 GLYATL2Q8WU03 294 aa13.66□□□□□ -0.22
PSPC1-202ENST00000427943 RBPMSQ93062 196 aaKnown RBP13.66□□□□□ -0.22
PSPC1-202ENST00000427943 SLIRPQ9GZT3 109 aaKnown RBP13.66□□□□□ -0.22
PSPC1-202ENST00000427943 TRAV14DV4A0A0A6YYC5 116 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 CRYM-AS1A6NIL9 109 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 SUB1P53999 127 aaKnown RBP eCLIP13.65□□□□□ -0.22
PSPC1-202ENST00000427943 TMEM268Q5VZI3 342 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 PVRIGQ6DKI7 326 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 TOMM20LQ6UXN7 152 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 FAM219AQ8IW50 185 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 FNDC4Q9H6D8 234 aaPredicted RBP13.65□□□□□ -0.22
PSPC1-202ENST00000427943 PRR13Q9NZ81 148 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 MRPL36Q9P0J6 103 aaKnown RBP13.65□□□□□ -0.22
PSPC1-202ENST00000427943 CACNG5Q9UF02 275 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 GPR132Q9UNW8 380 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 RYR2Q92736 4967 aa13.65□□□□□ -0.22
PSPC1-202ENST00000427943 ANKRD20A5PA0PJZ0 165 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 CORTO00230 105 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 GSTZ1O43708 216 aaPredicted RBP13.64□□□□□ -0.23
PSPC1-202ENST00000427943 NXPH3O95157 252 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 RPL35AP18077 110 aaKnown RBP13.64□□□□□ -0.23
PSPC1-202ENST00000427943 OPRK1P41145 380 aa13.64□□□□□ -0.23
PSPC1-202ENST00000427943 RPL5P46777 297 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms