RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 MOB3BQ86TA1 216 aa11.64□□□□□ -0.55
LIG1-202ENST00000427526 DEFB108BQ8NET1 73 aa11.64□□□□□ -0.55
LIG1-202ENST00000427526 UHRF2Q96PU4 802 aa11.64□□□□□ -0.55
LIG1-202ENST00000427526 RPUSD1Q9UJJ7 312 aaKnown RBP11.64□□□□□ -0.55
LIG1-202ENST00000427526 RAXQ9Y2V3 346 aa11.64□□□□□ -0.55
LIG1-202ENST00000427526 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
LIG1-202ENST00000427526 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
LIG1-202ENST00000427526 ZNF503Q96F45 646 aa11.64□□□□□ -0.55
LIG1-202ENST00000427526 NABP2Q9BQ15 211 aa11.64□□□□□ -0.55
LIG1-202ENST00000427526 PLEKHA3Q9HB20 300 aa11.64□□□□□ -0.55
LIG1-202ENST00000427526 TP53TG3Q9ULZ0 132 aa11.64□□□□□ -0.55
LIG1-202ENST00000427526 TEX50A0A1B0GTY4 177 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 M0R143 59 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 ACTL6BO94805 426 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 ZNF90Q03938 601 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 ZNF835Q9Y2P0 537 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 C16orf97H3BN30 126 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 LGALS4P56470 323 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 WFDC8Q8IUA0 241 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 RNASE8Q8TDE3 154 aaKnown RBP11.63□□□□□ -0.55
LIG1-202ENST00000427526 FKBP11Q9NYL4 201 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 ZNRD1Q9P1U0 126 aa11.63□□□□□ -0.55
LIG1-202ENST00000427526 CBLN1P23435 193 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 PSG5Q15238 335 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 TMEM30BQ3MIR4 351 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 C2orf83Q53S99 150 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 TEX36Q5VZQ5 186 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 GAL3ST2Q9H3Q3 398 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 SLC35D1Q9NTN3 355 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 V9GYV3 84 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 ATP5IP56385 69 aaPredicted RBP11.62□□□□□ -0.55
LIG1-202ENST00000427526 PNKDQ8N490 385 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 TMEM167BQ9NRX6 74 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 BET1LQ9NYM9 111 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 PLCE1Q9P212 2302 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 GRIFINA4D1Z8 144 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 LINC00310P59036 64 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 SELENOVP59797 346 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 RTL8BQ17RB0 113 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 SLC35E1Q96K37 410 aa11.62□□□□□ -0.55
LIG1-202ENST00000427526 ADGRG4Q8IZF6 3080 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 CIDEAO60543 219 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 ESDP10768 282 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 MLANAQ16655 118 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 SPTBN4Q9H254 2564 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 SMG1Q96Q15 3661 aaKnown RBP11.61□□□□□ -0.55
LIG1-202ENST00000427526 HELTA6NFD8 242 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 DPRXA6NFQ7 191 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 OR10J4P0C629 311 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 RNASE2P10153 161 aaKnown RBP11.61□□□□□ -0.55
LIG1-202ENST00000427526 GATA2P23769 480 aaPredicted RBP11.61□□□□□ -0.55
LIG1-202ENST00000427526 CRYBB3P26998 211 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 OR5I1Q13606 314 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 OR1L8Q8NGR8 309 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 OR5B3Q8NH48 314 aa11.61□□□□□ -0.55
LIG1-202ENST00000427526 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
LIG1-202ENST00000427526 TECRQ9NZ01 308 aaKnown RBP11.61□□□□□ -0.55
LIG1-202ENST00000427526 THBDP07204 575 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 OR5G3P0C626 314 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 FRMD6-AS1P0C7T7 363 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 SAA1P0DJI8 122 aaPredicted RBP11.6□□□□□ -0.55
LIG1-202ENST00000427526 ZNF833PQ6ZTB9 187 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 MMD2Q8IY49 270 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 MS4A10Q96PG2 267 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 C19orf24Q9BVV8 132 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 TNCP24821 2201 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 SCGB1D1O95968 90 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 OR10J1P30954 320 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 RPEL1Q2QD12 228 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 CENPWQ5EE01 88 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 PQLC2Q6ZP29 291 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 CMTM2Q8TAZ6 248 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 LINC00312Q9Y6C7 94 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 ROS1P08922 2347 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 RPLP1P05386 114 aaKnown RBP11.6□□□□□ -0.55
LIG1-202ENST00000427526 TNFSF4P23510 183 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 CDKN1BP46527 198 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 GNG4P50150 75 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 TMEM108Q6UXF1 575 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 OR10W1Q8NGF6 305 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 JKAMPQ9P055 326 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 NAGKQ9UJ70 344 aa11.6□□□□□ -0.55
LIG1-202ENST00000427526 POLR3KQ9Y2Y1 108 aaPredicted RBP11.6□□□□□ -0.55
LIG1-202ENST00000427526 hADV38S2A0JD32 116 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 GGTLC3B5MD39 225 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 TCF21O43680 179 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 OR1L6Q8NGR2 347 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 OR9G1Q8NH87 305 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 RND1Q92730 232 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 DYSFO75923 2080 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 ZZEF1O43149 2961 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 CD69Q07108 199 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 BSPH1Q075Z2 132 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 NUP37Q8NFH4 326 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 OSR1Q8TAX0 266 aaPredicted RBP11.59□□□□□ -0.55
LIG1-202ENST00000427526 NDUFA4L2Q9NRX3 87 aa11.59□□□□□ -0.55
LIG1-202ENST00000427526 PSMB11A5LHX3 300 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 CRISP2P16562 243 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms