RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 RELNP78509 3460 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 LOC105371242A0A075B767 164 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 CRYGBP07316 175 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 GNLYP22749 145 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 AKR1D1P51857 326 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 RND2P52198 227 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 SNRPEP62304 92 aaKnown RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 C1QL4Q86Z23 238 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 ITLN2Q8WWU7 325 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 TXNDC17Q9BRA2 123 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 SSBP3Q9BWW4 388 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 YTHDF2Q9Y5A9 579 aaKnown RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 KLF2Q9Y5W3 355 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 LY6LH3BQJ8 138 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 CLN5O75503 358 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 NDUFB4O95168 129 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 CDKN1AP38936 164 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 RPL35P42766 123 aaKnown RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 RPL27AP46776 148 aaKnown RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 MRPL41Q8IXM3 137 aaKnown RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 UBTD1Q9HAC8 227 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 METTL1Q9UBP6 276 aaKnown RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 SIGLEC9Q9Y336 463 aa11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 HRNRQ86YZ3 2850 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3D-202ENST00000427494 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
APOBEC3D-202ENST00000427494 SSBP2P81877 361 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3D-202ENST00000427494 NCOR2Q9Y618 2525 aa11.24□□□□□ -0.61
APOBEC3D-202ENST00000427494 TPRP12270 2363 aaKnown RBP11.24□□□□□ -0.61
APOBEC3D-202ENST00000427494 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 VENTXO95231 258 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 IGHV3-48P01763 117 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 TPTE2P1Q5T6R2 138 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 HCP5Q6MZN7 132 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 TECRQ9NZ01 308 aaKnown RBP11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 C5orf52A6NGY3 159 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 M0R1W7 72 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 OR5G3P0C626 314 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 APELAP0DMC3 54 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 HTR1DP28221 377 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 GPR6P46095 362 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 KLRD1Q13241 179 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 OR11H6Q8NGC7 330 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 NPIPB3Q92617 1050 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 MISP3Q96FF7 219 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 FAM210BQ96KR6 192 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
APOBEC3D-202ENST00000427494 H7BYZ3 331 aa11.22□□□□□ -0.61
APOBEC3D-202ENST00000427494 TIMM23O14925 209 aa11.22□□□□□ -0.61
APOBEC3D-202ENST00000427494 AREGP15514 252 aa11.22□□□□□ -0.61
APOBEC3D-202ENST00000427494 LDLRAD2Q5SZI1 272 aa11.22□□□□□ -0.61
APOBEC3D-202ENST00000427494 PPP1R27Q86WC6 154 aa11.22□□□□□ -0.61
APOBEC3D-202ENST00000427494 NECAP1Q8NC96 275 aa11.22□□□□□ -0.61
APOBEC3D-202ENST00000427494 DOK5Q9P104 306 aa11.22□□□□□ -0.61
APOBEC3D-202ENST00000427494 DCHS2Q6V1P9 2916 aa11.22□□□□□ -0.61
APOBEC3D-202ENST00000427494 ITPR1Q14643 2758 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 HIVEP3Q5T1R4 2406 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 C19orf84I3L1E1 186 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 NDUFS7O75251 213 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 TAS2R45P59539 299 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 PLGLAQ15195 96 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 ZNF114Q8NC26 417 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 ANAPC16Q96DE5 110 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 DPM3Q9P2X0 92 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 HILPDAQ9Y5L2 63 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 NAV3Q8IVL0 2385 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 ARHGAP32A7KAX9 2087 aa11.21□□□□□ -0.61
APOBEC3D-202ENST00000427494 OR7C2O60412 319 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 GALR1P47211 349 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 MFAP2P55001 183 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 C19orf35Q6ZS72 473 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 LINC01551Q86U37 167 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 THAP8Q8NA92 274 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 TMEM37Q8WXS4 190 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 OR5B12Q96R08 314 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 RNF5Q99942 180 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 TMEM167BQ9NRX6 74 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 AURKAIP1Q9NWT8 199 aaPredicted RBP11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 MRPL36Q9P0J6 103 aaKnown RBP11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 PLXNB1O43157 2135 aa11.21□□□□□ -0.62
APOBEC3D-202ENST00000427494 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 TCRBV4S1A1TA0A5B7 111 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 A6NNC1 897 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 UBE2CO00762 179 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 COX7A2P2O60397 106 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 PRTN3P24158 256 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 CEACAM3P40198 252 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 ZNF90Q03938 601 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 PQLC2Q6ZP29 291 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 LHFPL4Q7Z7J7 247 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 LINC00518Q8N0U6 118 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 ZNF503Q96F45 646 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 UHRF2Q96PU4 802 aa11.2□□□□□ -0.62
APOBEC3D-202ENST00000427494 MRPL32Q9BYC8 188 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms