RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 MT-CO2P00403 227 aa17.07■□□□□ 0.32
SEMA3C-204ENST00000427167 P0C879 139 aa17.07■□□□□ 0.32
SEMA3C-204ENST00000427167 UCP1P25874 307 aa17.07■□□□□ 0.32
SEMA3C-204ENST00000427167 RRNAD1Q96FB5 475 aaKnown RBP17.07■□□□□ 0.32
SEMA3C-204ENST00000427167 CITED4Q96RK1 184 aa17.07■□□□□ 0.32
SEMA3C-204ENST00000427167 RABL2AQ9UBK7 228 aaPredicted RBP17.07■□□□□ 0.32
SEMA3C-204ENST00000427167 RABL2BQ9UNT1 228 aa17.07■□□□□ 0.32
SEMA3C-204ENST00000427167 DNAH7Q8WXX0 4024 aa17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 RBMY1BA6NDE4 496 aaKnown RBP17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 RBMY1EA6NEQ0 496 aaKnown RBP17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 NUPL2O15504 423 aaKnown RBP17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 OR5AC1P0C628 307 aa17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 RBMY1DP0C7P1 496 aaKnown RBP17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 MFAP4P55083 255 aa17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 LINC00322Q6ZN03 302 aaPredicted RBP17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 MCFD2Q8NI22 146 aa17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 RTBDNQ9BSG5 229 aaPredicted RBP17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 GAR1Q9NY12 217 aaKnown RBP17.06■□□□□ 0.32
SEMA3C-204ENST00000427167 A0A0G2JRQ6 117 aa17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 CTSGP08311 255 aa17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 SNCAP37840 140 aa17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 HOXA1P49639 335 aaPredicted RBP17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 ANKRD55Q3KP44 614 aa17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 OR51S1Q8NGJ8 323 aa17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 TMEM222Q9H0R3 208 aa17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 C5orf66Q9H5L9 145 aa17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 NAA60Q9H7X0 242 aa17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 RSL24D1Q9UHA3 163 aaKnown RBP17.05■□□□□ 0.32
SEMA3C-204ENST00000427167 TRAV25A0A0B4J276 109 aa17.04■□□□□ 0.32
SEMA3C-204ENST00000427167 B3GALNT1O75752 331 aa17.04■□□□□ 0.32
SEMA3C-204ENST00000427167 YIF1AO95070 293 aa17.04■□□□□ 0.32
SEMA3C-204ENST00000427167 TNFSF8P32971 234 aa17.04■□□□□ 0.32
SEMA3C-204ENST00000427167 ETV6P41212 452 aa17.04■□□□□ 0.32
SEMA3C-204ENST00000427167 RELQ04864 619 aaPredicted RBP17.04■□□□□ 0.32
SEMA3C-204ENST00000427167 SURF2Q15527 256 aaPredicted RBP17.04■□□□□ 0.32
SEMA3C-204ENST00000427167 PRRT1Q99946 306 aa17.04■□□□□ 0.32
SEMA3C-204ENST00000427167 FAM110AQ9BQ89 295 aa17.04■□□□□ 0.32
SEMA3C-204ENST00000427167 ANKRD20A5PA0PJZ0 165 aa17.03■□□□□ 0.32
SEMA3C-204ENST00000427167 FABP12A6NFH5 140 aa17.03■□□□□ 0.32
SEMA3C-204ENST00000427167 CCDC160A6NGH7 325 aa17.03■□□□□ 0.32
SEMA3C-204ENST00000427167 GSTZ1O43708 216 aaPredicted RBP17.03■□□□□ 0.32
SEMA3C-204ENST00000427167 GNG7O60262 68 aa17.03■□□□□ 0.32
SEMA3C-204ENST00000427167 LYL1P12980 280 aa17.03■□□□□ 0.32
SEMA3C-204ENST00000427167 CASC10Q5T4H9 136 aa17.03■□□□□ 0.32
SEMA3C-204ENST00000427167 HIPK2Q9H2X6 1198 aa17.03■□□□□ 0.32
SEMA3C-204ENST00000427167 ENY2Q9NPA8 101 aa17.03■□□□□ 0.32
SEMA3C-204ENST00000427167 LHFPL5Q8TAF8 219 aa17.02■□□□□ 0.32
SEMA3C-204ENST00000427167 GLYATL2Q8WU03 294 aa17.02■□□□□ 0.32
SEMA3C-204ENST00000427167 TXN2Q99757 166 aa17.02■□□□□ 0.32
SEMA3C-204ENST00000427167 EDA2RQ9HAV5 297 aa17.02■□□□□ 0.32
SEMA3C-204ENST00000427167 MCUBQ9NWR8 336 aa17.02■□□□□ 0.32
SEMA3C-204ENST00000427167 GPR132Q9UNW8 380 aa17.02■□□□□ 0.32
SEMA3C-204ENST00000427167 CRYM-AS1A6NIL9 109 aa17.01■□□□□ 0.31
SEMA3C-204ENST00000427167 C15orf62A8K5M9 175 aa17.01■□□□□ 0.31
SEMA3C-204ENST00000427167 K7EMT4 169 aa17.01■□□□□ 0.31
SEMA3C-204ENST00000427167 CDS2O95674 445 aa17.01■□□□□ 0.31
SEMA3C-204ENST00000427167 Q6ZRM9 215 aa17.01■□□□□ 0.31
SEMA3C-204ENST00000427167 RBPMSQ93062 196 aaKnown RBP17.01■□□□□ 0.31
SEMA3C-204ENST00000427167 SPAG8Q99932 426 aaPredicted RBP17.01■□□□□ 0.31
SEMA3C-204ENST00000427167 IGHV3-49A0A0A0MS15 119 aa17■□□□□ 0.31
SEMA3C-204ENST00000427167 RNASE2P10153 161 aaKnown RBP17■□□□□ 0.31
SEMA3C-204ENST00000427167 FCGR2BP31994 310 aaPredicted RBP17■□□□□ 0.31
SEMA3C-204ENST00000427167 DHODHQ02127 395 aa17■□□□□ 0.31
SEMA3C-204ENST00000427167 TMEM268Q5VZI3 342 aa17■□□□□ 0.31
SEMA3C-204ENST00000427167 ZFAND6Q6FIF0 208 aa17■□□□□ 0.31
SEMA3C-204ENST00000427167 LAMTOR1Q6IAA8 161 aa17■□□□□ 0.31
SEMA3C-204ENST00000427167 FAM219AQ8IW50 185 aa17■□□□□ 0.31
SEMA3C-204ENST00000427167 SELENOHQ8IZQ5 122 aaKnown RBP17■□□□□ 0.31
SEMA3C-204ENST00000427167 ZNF414Q96IQ9 312 aa17■□□□□ 0.31
SEMA3C-204ENST00000427167 NXF2Q9GZY0 626 aaKnown RBP17■□□□□ 0.31
SEMA3C-204ENST00000427167 UBQLN2Q9UHD9 624 aa17■□□□□ 0.31
SEMA3C-204ENST00000427167 SCP2D1Q9UJQ7 156 aa17■□□□□ 0.31
SEMA3C-204ENST00000427167 INS-IGF2F8WCM5 200 aa16.99■□□□□ 0.31
SEMA3C-204ENST00000427167 TSPAN4O14817 238 aa16.99■□□□□ 0.31
SEMA3C-204ENST00000427167 SUB1P53999 127 aaKnown RBP eCLIP16.99■□□□□ 0.31
SEMA3C-204ENST00000427167 DUSP18Q8NEJ0 188 aa16.99■□□□□ 0.31
SEMA3C-204ENST00000427167 SOSTQ9BQB4 213 aa16.99■□□□□ 0.31
SEMA3C-204ENST00000427167 PRR13Q9NZ81 148 aa16.99■□□□□ 0.31
SEMA3C-204ENST00000427167 CACNG5Q9UF02 275 aa16.99■□□□□ 0.31
SEMA3C-204ENST00000427167 RYR3Q15413 4870 aa16.99■□□□□ 0.31
SEMA3C-204ENST00000427167 NPBWR1P48145 328 aa16.98■□□□□ 0.31
SEMA3C-204ENST00000427167 TMEM116Q8NCL8 245 aa16.98■□□□□ 0.31
SEMA3C-204ENST00000427167 GGTLC1Q9BX51 225 aa16.98■□□□□ 0.31
SEMA3C-204ENST00000427167 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.98■□□□□ 0.31
SEMA3C-204ENST00000427167 SMPXQ9UHP9 88 aa16.98■□□□□ 0.31
SEMA3C-204ENST00000427167 IGHV3OR16-13A0A075B7E8 117 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 IGHV3-74A0A0B4J1X5 117 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 IGHV7-4-1A0A0J9YVY3 117 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 CORTO00230 105 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 SPCS3P61009 180 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 PYDC2Q56P42 97 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 GPR146Q96CH1 333 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 OR10C1Q96KK4 312 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 RNF2Q99496 336 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 RHPN1-AS1Q9BWJ2 59 aa16.97■□□□□ 0.31
SEMA3C-204ENST00000427167 LOC102724200A0A096LPH7 203 aaPredicted RBP16.96■□□□□ 0.31
SEMA3C-204ENST00000427167 NXPH3O95157 252 aa16.96■□□□□ 0.31
SEMA3C-204ENST00000427167 AKR1C4P17516 323 aa16.96■□□□□ 0.31
SEMA3C-204ENST00000427167 OPRK1P41145 380 aa16.96■□□□□ 0.31
SEMA3C-204ENST00000427167 TMEM230Q96A57 120 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms