RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
GPC1-204ENST00000426280 CLEC3BP05452 202 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 FGF2P09038 288 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 HOXB5P09067 269 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 HSPE1P61604 102 aaKnown RBP9.64□□□□□ -0.87
GPC1-204ENST00000426280 NMSQ5H8A3 153 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 UNQ9165/PRO28630Q6UXU0 137 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 OR5B3Q8NH48 314 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 ZNF502Q8TBZ5 544 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 LSM10Q969L4 123 aaKnown RBP9.64□□□□□ -0.87
GPC1-204ENST00000426280 SEC22CQ9BRL7 303 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 FKBP11Q9NYL4 201 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 SHPKQ9UHJ6 478 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 HUWE1Q7Z6Z7 4374 aaKnown RBP9.64□□□□□ -0.87
GPC1-204ENST00000426280 GGCTO75223 188 aaKnown RBP9.63□□□□□ -0.87
GPC1-204ENST00000426280 ADAP1O75689 374 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 IFNA17P01571 189 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 DEFA4P12838 97 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 ARL3P36405 182 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 SRPXP78539 464 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 PRCDQ00LT1 54 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 DEFB114Q30KQ6 69 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 CD300EQ496F6 205 aaPredicted RBP9.63□□□□□ -0.87
GPC1-204ENST00000426280 FAM219AQ8IW50 185 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 LRTM2Q8N967 370 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 C19orf73Q9NVV2 129 aa9.63□□□□□ -0.87
GPC1-204ENST00000426280 C2orf70A6NJV1 201 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 SULT1A3P0DMM9 295 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 SULT1A4P0DMN0 295 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 IGHV4-30-4P0DP06 118 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 FOLR2P14207 255 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 DEFA1P59665 94 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 DEFA3P59666 94 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 TM4SF20Q53R12 229 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 SLC25A24Q6NUK1 477 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 GPHB5Q86YW7 130 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 DUSP18Q8NEJ0 188 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 SRSF8Q9BRL6 282 aaKnown RBP9.62□□□□□ -0.87
GPC1-204ENST00000426280 PLEKHA3Q9HB20 300 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.62□□□□□ -0.87
GPC1-204ENST00000426280 SIGLEC8Q9NYZ4 499 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 U3KQK5 164 aa9.62□□□□□ -0.87
GPC1-204ENST00000426280 DUXBA0A1W2PPF3 345 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 TMEM213A2RRL7 107 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 MPTX1A8MV57 137 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 K7EIM0 57 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 LGALS9O00182 355 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 CD7P09564 240 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 HIST1H1BP16401 226 aaKnown RBP9.61□□□□□ -0.87
GPC1-204ENST00000426280 GPR183P32249 361 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 SMCO1Q147U7 214 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 TATDN3Q17R31 274 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 GGNBP1Q5YKI7 109 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 THOC7Q6I9Y2 204 aaKnown RBP9.61□□□□□ -0.87
GPC1-204ENST00000426280 OR2C3Q8N628 320 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 COQ8AQ8NI60 647 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 SCARB1Q8WTV0 552 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 EEF1AKMT3Q96AZ1 226 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 PDCD10Q9BUL8 212 aa9.61□□□□□ -0.87
GPC1-204ENST00000426280 F11RQ9Y624 299 aaKnown RBP9.61□□□□□ -0.87
GPC1-204ENST00000426280 SORL1Q92673 2214 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 ZNF320A2RRD8 509 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 IGHV3-48P01763 117 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 NHLRC4P0CG21 123 aaPredicted RBP9.6□□□□□ -0.87
GPC1-204ENST00000426280 CBLN1P23435 193 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 ADMP35318 185 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 HOXA1P49639 335 aaPredicted RBP9.6□□□□□ -0.87
GPC1-204ENST00000426280 DCTN2Q13561 401 aaKnown RBP9.6□□□□□ -0.87
GPC1-204ENST00000426280 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 PLET1Q6UQ28 207 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 UXS1Q8NBZ7 420 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 OR1S1Q8NH92 325 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 ZNF431Q8TF32 576 aaPredicted RBP9.6□□□□□ -0.87
GPC1-204ENST00000426280 MITD1Q8WV92 249 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 WDR89Q96FK6 387 aaPredicted RBP9.6□□□□□ -0.87
GPC1-204ENST00000426280 CHRDL1Q9BU40 450 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 WFDC10AQ9H1F0 79 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 MLXQ9UH92 298 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 TMED3Q9Y3Q3 217 aa9.6□□□□□ -0.87
GPC1-204ENST00000426280 IGHV3OR16-8A0A075B7F1 116 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 TRBV7-1A0A0A6YYK4 115 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 A0A1B0GU03 582 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 CEBPZOSA8MTT3 80 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 INMT-MINDY4F8WBC2 141 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 CCSO14618 274 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 PITX3O75364 302 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 DHFRP00374 187 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 SPCS3P61009 180 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 ERHP84090 104 aaKnown RBP9.59□□□□□ -0.87
GPC1-204ENST00000426280 HSD17B13Q7Z5P4 300 aaPredicted RBP9.59□□□□□ -0.87
GPC1-204ENST00000426280 WWC2-AS2Q96NR7 200 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 PEMTQ9UBM1 199 aa9.59□□□□□ -0.87
GPC1-204ENST00000426280 OR2T8A6NH00 312 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 A8MZ25 164 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 I3L2K1 104 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 TGOLN2O43493 480 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 IL5P05113 134 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 RNASE2P10153 161 aaKnown RBP9.58□□□□□ -0.88
GPC1-204ENST00000426280 TNFRSF9Q07011 255 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 MLANAQ16655 118 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms