RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 RRAS2P62070 204 aaPredicted RBP18.72■□□□□ 0.59
APOE-202ENST00000425718 KIAA0141Q14154 515 aaPredicted RBP18.72■□□□□ 0.59
APOE-202ENST00000425718 NSUN5P1Q3KNT7 163 aa18.72■□□□□ 0.59
APOE-202ENST00000425718 PVRIGQ6DKI7 326 aa18.72■□□□□ 0.59
APOE-202ENST00000425718 LCNL1Q6ZST4 164 aa18.72■□□□□ 0.59
APOE-202ENST00000425718 SMIM8Q96KF7 97 aa18.72■□□□□ 0.59
APOE-202ENST00000425718 MAGT1Q9H0U3 335 aa18.72■□□□□ 0.59
APOE-202ENST00000425718 L7N2F9 121 aa18.71■□□□□ 0.59
APOE-202ENST00000425718 MBPP02686 304 aaPredicted RBP18.71■□□□□ 0.59
APOE-202ENST00000425718 POLR2GP62487 172 aaKnown RBP eCLIP18.71■□□□□ 0.59
APOE-202ENST00000425718 VAMP2P63027 116 aa18.71■□□□□ 0.59
APOE-202ENST00000425718 SRSF4Q08170 494 aaKnown RBP18.71■□□□□ 0.59
APOE-202ENST00000425718 ETFRF1Q6IPR1 90 aa18.71■□□□□ 0.59
APOE-202ENST00000425718 MISP3Q96FF7 219 aa18.71■□□□□ 0.59
APOE-202ENST00000425718 STRAPQ9Y3F4 350 aaKnown RBP18.71■□□□□ 0.59
APOE-202ENST00000425718 SSSCA1O60232 199 aa18.7■□□□□ 0.58
APOE-202ENST00000425718 IAPPP10997 89 aa18.7■□□□□ 0.58
APOE-202ENST00000425718 ZNF343Q6P1L6 599 aa18.7■□□□□ 0.58
APOE-202ENST00000425718 WNK1Q9H4A3 2382 aa18.7■□□□□ 0.58
APOE-202ENST00000425718 A0A1W2PRX2 142 aa18.69■□□□□ 0.58
APOE-202ENST00000425718 K7EPK0 472 aa18.69■□□□□ 0.58
APOE-202ENST00000425718 TSC22D2O75157 780 aa18.69■□□□□ 0.58
APOE-202ENST00000425718 SCGB2A1O75556 95 aa18.69■□□□□ 0.58
APOE-202ENST00000425718 S100A10P60903 97 aa18.69■□□□□ 0.58
APOE-202ENST00000425718 IL15RAQ13261 267 aa18.69■□□□□ 0.58
APOE-202ENST00000425718 PSENENQ9NZ42 101 aa18.69■□□□□ 0.58
APOE-202ENST00000425718 LSM5Q9Y4Y9 91 aaKnown RBP18.69■□□□□ 0.58
APOE-202ENST00000425718 I3L521 148 aa18.68■□□□□ 0.58
APOE-202ENST00000425718 NDUFB8O95169 186 aa18.68■□□□□ 0.58
APOE-202ENST00000425718 SIX6O95475 246 aa18.68■□□□□ 0.58
APOE-202ENST00000425718 IFNA4P05014 189 aa18.68■□□□□ 0.58
APOE-202ENST00000425718 OR8U8P0C7N1 319 aa18.68■□□□□ 0.58
APOE-202ENST00000425718 H2BFSP57053 126 aa18.68■□□□□ 0.58
APOE-202ENST00000425718 TXN2Q99757 166 aa18.68■□□□□ 0.58
APOE-202ENST00000425718 GNB4Q9HAV0 340 aa18.68■□□□□ 0.58
APOE-202ENST00000425718 RANGRFQ9HD47 186 aaPredicted RBP18.68■□□□□ 0.58
APOE-202ENST00000425718 RCL1Q9Y2P8 373 aaKnown RBP18.68■□□□□ 0.58
APOE-202ENST00000425718 ADARB2-AS1A8MUL3 147 aa18.67■□□□□ 0.58
APOE-202ENST00000425718 HSPB1P04792 205 aaKnown RBP18.67■□□□□ 0.58
APOE-202ENST00000425718 OPRK1P41145 380 aa18.67■□□□□ 0.58
APOE-202ENST00000425718 MFAP2P55001 183 aa18.67■□□□□ 0.58
APOE-202ENST00000425718 FCN2Q15485 313 aa18.67■□□□□ 0.58
APOE-202ENST00000425718 C19orf35Q6ZS72 473 aa18.67■□□□□ 0.58
APOE-202ENST00000425718 DPF1Q92782 380 aa18.67■□□□□ 0.58
APOE-202ENST00000425718 C21orf62Q9NYP8 219 aa18.67■□□□□ 0.58
APOE-202ENST00000425718 PEF1Q9UBV8 284 aaKnown RBP18.67■□□□□ 0.58
APOE-202ENST00000425718 DMRT1Q9Y5R6 373 aa18.67■□□□□ 0.58
APOE-202ENST00000425718 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.66■□□□□ 0.58
APOE-202ENST00000425718 MT-CO2P00403 227 aa18.66■□□□□ 0.58
APOE-202ENST00000425718 IGHV3-11P01762 117 aa18.66■□□□□ 0.58
APOE-202ENST00000425718 SLC25A4P12235 298 aa18.66■□□□□ 0.58
APOE-202ENST00000425718 FCGR2BP31994 310 aaPredicted RBP18.66■□□□□ 0.58
APOE-202ENST00000425718 MYCNOSP40205 109 aa18.66■□□□□ 0.58
APOE-202ENST00000425718 MFAP4P55083 255 aa18.66■□□□□ 0.58
APOE-202ENST00000425718 RAB32Q13637 225 aa18.66■□□□□ 0.58
APOE-202ENST00000425718 SPANXN5Q5MJ07 72 aa18.66■□□□□ 0.58
APOE-202ENST00000425718 PINX1Q96BK5 328 aaKnown RBP18.66■□□□□ 0.58
APOE-202ENST00000425718 I3L2K1 104 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 K7EIM0 57 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 PF4P02776 101 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 GIPP09681 153 aaPredicted RBP18.65■□□□□ 0.58
APOE-202ENST00000425718 ZP3P21754 424 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 GPX4P36969 197 aaPredicted RBP18.65■□□□□ 0.58
APOE-202ENST00000425718 NPBWR1P48145 328 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 FGL1Q08830 312 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 ZNF616Q08AN1 781 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 C8orf86Q6ZUL3 223 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 SCARB1Q8WTV0 552 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 PPP1R1CQ8WVI7 109 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 CACNG8Q8WXS5 425 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 ZNF436Q9C0F3 470 aaPredicted RBP18.65■□□□□ 0.58
APOE-202ENST00000425718 PAIP2BQ9ULR5 123 aaKnown RBP18.65■□□□□ 0.58
APOE-202ENST00000425718 ANK2Q01484 3957 aa18.65■□□□□ 0.58
APOE-202ENST00000425718 E5RGE8 158 aa18.64■□□□□ 0.57
APOE-202ENST00000425718 LINC01619G3V211 115 aa18.64■□□□□ 0.57
APOE-202ENST00000425718 CCL24O00175 119 aa18.64■□□□□ 0.57
APOE-202ENST00000425718 DEDDO75618 318 aa18.64■□□□□ 0.57
APOE-202ENST00000425718 SPSB3Q6PJ21 355 aa18.64■□□□□ 0.57
APOE-202ENST00000425718 Q6ZNX1 250 aa18.64■□□□□ 0.57
APOE-202ENST00000425718 OR11H7Q8NGC8 314 aa18.64■□□□□ 0.57
APOE-202ENST00000425718 ZNF502Q8TBZ5 544 aa18.64■□□□□ 0.57
APOE-202ENST00000425718 DCUN1D4Q92564 292 aa18.64■□□□□ 0.57
APOE-202ENST00000425718 C15orf62A8K5M9 175 aa18.63■□□□□ 0.57
APOE-202ENST00000425718 CXCL3P19876 107 aa18.63■□□□□ 0.57
APOE-202ENST00000425718 RAP2BP61225 183 aa18.63■□□□□ 0.57
APOE-202ENST00000425718 ETV3LQ6ZN32 361 aa18.63■□□□□ 0.57
APOE-202ENST00000425718 OR11H1Q8NG94 326 aa18.63■□□□□ 0.57
APOE-202ENST00000425718 OR1N2Q8NGR9 330 aa18.63■□□□□ 0.57
APOE-202ENST00000425718 BSCL2Q96G97 398 aaPredicted RBP18.63■□□□□ 0.57
APOE-202ENST00000425718 OR5B12Q96R08 314 aa18.63■□□□□ 0.57
APOE-202ENST00000425718 MFSD2BA6NFX1 497 aa18.62■□□□□ 0.57
APOE-202ENST00000425718 BCAP31P51572 246 aa18.62■□□□□ 0.57
APOE-202ENST00000425718 CD69Q07108 199 aa18.62■□□□□ 0.57
APOE-202ENST00000425718 ACSM6Q6P461 480 aa18.62■□□□□ 0.57
APOE-202ENST00000425718 TRAV30A0A087WSZ9 112 aa18.61■□□□□ 0.57
APOE-202ENST00000425718 MPC2O95563 127 aa18.61■□□□□ 0.57
APOE-202ENST00000425718 PAX9P55771 341 aa18.61■□□□□ 0.57
APOE-202ENST00000425718 DEFA5Q01523 94 aa18.61■□□□□ 0.57
APOE-202ENST00000425718 LRRC37A5PQ49AS3 106 aa18.61■□□□□ 0.57
APOE-202ENST00000425718 Q56UQ5 140 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms