RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 TMEM11P17152 192 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 DLX1P56177 255 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 TAS2R45P59539 299 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 SRSF3P84103 164 aaKnown RBP7.57□□□□□ -1.2
HMGB4-201ENST00000425537 WT1-ASQ06250 92 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 PAX8Q06710 450 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 GAMTQ14353 236 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 C5orf64Q2M2E5 130 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 LHFPL4Q7Z7J7 247 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 OR1L4Q8NGR5 311 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 ABHD5Q8WTS1 349 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 SRSF12Q8WXF0 261 aaKnown RBP7.57□□□□□ -1.2
HMGB4-201ENST00000425537 RAB24Q969Q5 203 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 TBX15Q96SF7 602 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 PFDN5Q99471 154 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 SCRT1Q9BWW7 348 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 VSIRQ9H7M9 311 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 SLC25A22Q9H936 323 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 SLC45A2Q9UMX9 530 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 F11RQ9Y624 299 aaKnown RBP7.57□□□□□ -1.2
HMGB4-201ENST00000425537 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 NBPF19A0A087WUL8 3843 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 ASH1LQ9NR48 2969 aaKnown RBP7.56□□□□□ -1.2
HMGB4-201ENST00000425537 A0A1W2PRD5 423 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 A0A1W2PRF3 423 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 A0A1W2PRM7 423 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 CGB1A6NKQ9 187 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 ZFP92A6NM28 416 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 NCBP2LA6PVI3 153 aaKnown RBP7.56□□□□□ -1.2
HMGB4-201ENST00000425537 FAM157AC9JC47 383 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 MSMBP08118 114 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 SRP19P09132 144 aaKnown RBP7.56□□□□□ -1.2
HMGB4-201ENST00000425537 FBP1P09467 338 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 DEFA4P12838 97 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 BPIFB3P59826 476 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 CCL20P78556 96 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 PRR20EP86478 221 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 PRR20CP86479 221 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 PRR20DP86480 221 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 PRR20BP86481 221 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 PRR20AP86496 221 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 ICAM4Q14773 271 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 ZNF726P1Q15940 193 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 FAM74A3Q4VXF1 159 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 C10orf55Q5SWW7 151 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 MIC13Q5XKP0 118 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 PVRIGQ6DKI7 326 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 ZNF562Q6V9R5 426 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 S100A7AQ86SG5 101 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 LRRC75A-AS1Q8N1F1 130 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 STPG3Q8N7X2 389 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 RXFP4Q8TDU9 374 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 GATAD1Q8WUU5 269 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 MISP3Q96FF7 219 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 PERPQ96FX8 193 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 RITA1Q96K30 269 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 NIPSNAP3BQ9BS92 247 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 MRPL32Q9BYC8 188 aaKnown RBP7.56□□□□□ -1.2
HMGB4-201ENST00000425537 TPSG1Q9NRR2 321 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 THYN1Q9P016 225 aa7.56□□□□□ -1.2
HMGB4-201ENST00000425537 DCHS2Q6V1P9 2916 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 CELSR2Q9HCU4 2923 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 IGHV1-69DA0A0B4J2H0 117 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 IGHV4-61A0A0C4DH41 118 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 TMEM250H0YL14 139 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 IGHV1-69P01742 117 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 ADCYAP1P18509 176 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 CNTFRP26992 372 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 OR10J1P30954 320 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 SAA4P35542 130 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 FGF8P55075 233 aaPredicted RBP7.55□□□□□ -1.2
HMGB4-201ENST00000425537 MEF2BQ02080 365 aaPredicted RBP7.55□□□□□ -1.2
HMGB4-201ENST00000425537 PRB3Q04118 309 aaPredicted RBP7.55□□□□□ -1.2
HMGB4-201ENST00000425537 PNRC1Q12796 327 aaPredicted RBP7.55□□□□□ -1.2
HMGB4-201ENST00000425537 BTN1A1Q13410 526 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 FXYD3Q14802 87 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 RHEBQ15382 184 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 CLEC12BQ2HXU8 276 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 MRGPRG-AS1Q2M3A8 158 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 CYP2G1PQ6ZSU1 146 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 IQCF2Q8IXL9 164 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 Q8N6K4 173 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 THAP8Q8NA92 274 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 CLRN3Q8NCR9 226 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 SSMEM1Q8WWF3 244 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 ACY3Q96HD9 319 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 TMEM68Q96MH6 324 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 RARRES2Q99969 163 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 RASL11BQ9BPW5 248 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 TECRQ9NZ01 308 aaKnown RBP7.55□□□□□ -1.2
HMGB4-201ENST00000425537 PRELID1Q9Y255 219 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 ARL2-SNX15V9GYD0 113 aa7.55□□□□□ -1.2
HMGB4-201ENST00000425537 SETXQ7Z333 2677 aaKnown RBP7.55□□□□□ -1.2
HMGB4-201ENST00000425537 ELOA3CA0A087WX78 387 aaPredicted RBP7.54□□□□□ -1.2
HMGB4-201ENST00000425537 TCRBV4S1A1TA0A5B7 111 aa7.54□□□□□ -1.2
HMGB4-201ENST00000425537 NPIPB5A8MRT5 1133 aa7.54□□□□□ -1.2
HMGB4-201ENST00000425537 B4DEV8 164 aa7.54□□□□□ -1.2
HMGB4-201ENST00000425537 TEX22C9J3V5 150 aa7.54□□□□□ -1.2
HMGB4-201ENST00000425537 F6UZH7 168 aa7.54□□□□□ -1.2
HMGB4-201ENST00000425537 J3QLI3 93 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms