RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 B2MP61769 119 aa21.14■□□□□ 0.98
LDB1-202ENST00000425280 KHDC3LQ587J8 217 aa21.14■□□□□ 0.98
LDB1-202ENST00000425280 STPG3Q8N7X2 389 aa21.14■□□□□ 0.98
LDB1-202ENST00000425280 ZNF114Q8NC26 417 aa21.14■□□□□ 0.98
LDB1-202ENST00000425280 SRSF12Q8WXF0 261 aaKnown RBP21.14■□□□□ 0.98
LDB1-202ENST00000425280 MALSU1Q96EH3 234 aa21.14■□□□□ 0.98
LDB1-202ENST00000425280 FNDC4Q9H6D8 234 aaPredicted RBP21.14■□□□□ 0.98
LDB1-202ENST00000425280 PVRIGQ6DKI7 326 aa21.14■□□□□ 0.97
LDB1-202ENST00000425280 OR2T6Q8NHC8 308 aa21.14■□□□□ 0.97
LDB1-202ENST00000425280 HSPB1P04792 205 aaKnown RBP21.13■□□□□ 0.97
LDB1-202ENST00000425280 SRP19P09132 144 aaKnown RBP21.13■□□□□ 0.97
LDB1-202ENST00000425280 BCL2P10415 239 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 Q8N6K4 173 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 SLC35E1Q96K37 410 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 SLC45A2Q9UMX9 530 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 SNAPINO95295 136 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 SAA4P35542 130 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 MFAP2P55001 183 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 PRR20EP86478 221 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 PRR20CP86479 221 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 PRR20DP86480 221 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 PRR20BP86481 221 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 PRR20AP86496 221 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 PMS2P11Q13670 270 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 EBI3Q14213 229 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 TMPRSS5Q9H3S3 457 aa21.13■□□□□ 0.97
LDB1-202ENST00000425280 NPBWR1P48145 328 aa21.12■□□□□ 0.97
LDB1-202ENST00000425280 C19orf35Q6ZS72 473 aa21.12■□□□□ 0.97
LDB1-202ENST00000425280 FBP1P09467 338 aa21.11■□□□□ 0.97
LDB1-202ENST00000425280 LINC00869P0C866 280 aa21.11■□□□□ 0.97
LDB1-202ENST00000425280 DSCR9P59020 149 aa21.11■□□□□ 0.97
LDB1-202ENST00000425280 CRYBG3Q68DQ2 2970 aa21.11■□□□□ 0.97
LDB1-202ENST00000425280 CENPVL3A0A0U1RRI6 287 aa21.11■□□□□ 0.97
LDB1-202ENST00000425280 OR10J1P30954 320 aa21.11■□□□□ 0.97
LDB1-202ENST00000425280 C5orf64Q2M2E5 130 aa21.11■□□□□ 0.97
LDB1-202ENST00000425280 ACY3Q96HD9 319 aa21.11■□□□□ 0.97
LDB1-202ENST00000425280 NPFFO15130 113 aa21.1■□□□□ 0.97
LDB1-202ENST00000425280 CNIH1O95406 144 aa21.1■□□□□ 0.97
LDB1-202ENST00000425280 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.1■□□□□ 0.97
LDB1-202ENST00000425280 A0A1W2PPV4 95 aa21.09■□□□□ 0.97
LDB1-202ENST00000425280 IFNA1P01562 189 aa21.09■□□□□ 0.97
LDB1-202ENST00000425280 COL8A1P27658 744 aa21.09■□□□□ 0.97
LDB1-202ENST00000425280 PIP4P2Q8N4L2 257 aa21.09■□□□□ 0.97
LDB1-202ENST00000425280 OR1P1Q8NH06 330 aa21.09■□□□□ 0.97
LDB1-202ENST00000425280 SOHLH1Q5JUK2 328 aa21.09■□□□□ 0.97
LDB1-202ENST00000425280 SRSF8Q9BRL6 282 aaKnown RBP21.09■□□□□ 0.97
LDB1-202ENST00000425280 F11RQ9Y624 299 aaKnown RBP21.09■□□□□ 0.97
LDB1-202ENST00000425280 IGHV3-48P01763 117 aa21.08■□□□□ 0.97
LDB1-202ENST00000425280 CYB561D1Q8N8Q1 229 aa21.08■□□□□ 0.97
LDB1-202ENST00000425280 CLRN3Q8NCR9 226 aa21.08■□□□□ 0.97
LDB1-202ENST00000425280 MISP3Q96FF7 219 aa21.08■□□□□ 0.97
LDB1-202ENST00000425280 TMEM11P17152 192 aa21.08■□□□□ 0.96
LDB1-202ENST00000425280 FAM120AOSQ5T036 256 aa21.08■□□□□ 0.96
LDB1-202ENST00000425280 RBMS3Q6XE24 437 aaKnown RBP21.08■□□□□ 0.96
LDB1-202ENST00000425280 MRPL36Q9P0J6 103 aaKnown RBP21.08■□□□□ 0.96
LDB1-202ENST00000425280 VAX2Q9UIW0 290 aa21.08■□□□□ 0.96
LDB1-202ENST00000425280 VPS13CQ709C8 3753 aa21.07■□□□□ 0.96
LDB1-202ENST00000425280 DNASE2O00115 360 aaPredicted RBP21.07■□□□□ 0.96
LDB1-202ENST00000425280 FXYD3Q14802 87 aa21.07■□□□□ 0.96
LDB1-202ENST00000425280 NPIPB3Q92617 1050 aa21.07■□□□□ 0.96
LDB1-202ENST00000425280 FAM74A7A6NL05 159 aa21.06■□□□□ 0.96
LDB1-202ENST00000425280 CLEC12BQ2HXU8 276 aa21.06■□□□□ 0.96
LDB1-202ENST00000425280 FAM74A3Q4VXF1 159 aa21.06■□□□□ 0.96
LDB1-202ENST00000425280 DMRT1Q9Y5R6 373 aa21.06■□□□□ 0.96
LDB1-202ENST00000425280 NCBP2LA6PVI3 153 aaKnown RBP21.06■□□□□ 0.96
LDB1-202ENST00000425280 CRYGCP07315 174 aa21.06■□□□□ 0.96
LDB1-202ENST00000425280 GATA2P23769 480 aaPredicted RBP21.06■□□□□ 0.96
LDB1-202ENST00000425280 TMEM249Q2WGJ8 235 aa21.06■□□□□ 0.96
LDB1-202ENST00000425280 SLC35E3Q7Z769 313 aa21.06■□□□□ 0.96
LDB1-202ENST00000425280 IQCF2Q8IXL9 164 aa21.06■□□□□ 0.96
LDB1-202ENST00000425280 ABHD5Q8WTS1 349 aa21.06■□□□□ 0.96
LDB1-202ENST00000425280 FAM106CPP0CH98 169 aa21.05■□□□□ 0.96
LDB1-202ENST00000425280 CEBPGP53567 150 aa21.05■□□□□ 0.96
LDB1-202ENST00000425280 ETFRF1Q6IPR1 90 aa21.05■□□□□ 0.96
LDB1-202ENST00000425280 GATAD1Q8WUU5 269 aa21.05■□□□□ 0.96
LDB1-202ENST00000425280 SEPSECSQ9HD40 501 aaKnown RBP21.05■□□□□ 0.96
LDB1-202ENST00000425280 NUPL2O15504 423 aaKnown RBP21.05■□□□□ 0.96
LDB1-202ENST00000425280 BRS3P32247 399 aa21.05■□□□□ 0.96
LDB1-202ENST00000425280 KRTAP10-9P60411 292 aa21.05■□□□□ 0.96
LDB1-202ENST00000425280 THAP8Q8NA92 274 aa21.05■□□□□ 0.96
LDB1-202ENST00000425280 SLC25A33Q9BSK2 321 aa21.05■□□□□ 0.96
LDB1-202ENST00000425280 FBN2P35556 2912 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 MSMBP08118 114 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 STAG3L2P0CL84 134 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 STAG3L3P0CL85 134 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 RND2P52198 227 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 RHOBP62745 196 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 SPATA31B1PQ5VZV4 182 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 RUSC1-AS1Q66K80 236 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 CYP2G1PQ6ZSU1 146 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 SUN5Q8TC36 379 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 MANBALQ9NQG1 85 aa21.04■□□□□ 0.96
LDB1-202ENST00000425280 TMA7Q9Y2S6 64 aaKnown RBP21.04■□□□□ 0.96
LDB1-202ENST00000425280 IGKV1D-37A0A075B6S9 117 aa21.03■□□□□ 0.96
LDB1-202ENST00000425280 IGHV3OR16-10A0A075B7F0 116 aa21.03■□□□□ 0.96
LDB1-202ENST00000425280 CORTO00230 105 aa21.03■□□□□ 0.96
LDB1-202ENST00000425280 SLC25A16P16260 332 aa21.03■□□□□ 0.96
LDB1-202ENST00000425280 IGHV1-69DA0A0B4J2H0 117 aa21.03■□□□□ 0.96
LDB1-202ENST00000425280 IGHV1-69P01742 117 aa21.03■□□□□ 0.96
LDB1-202ENST00000425280 PSMB3P49720 205 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms