RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 VAMP1P23763 118 aa16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 CCR6P51684 374 aa16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 SPCS3P61009 180 aa16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 RBMS2Q15434 407 aaKnown RBP16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 TMEM128Q5BJH2 165 aa16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 LCN12Q6JVE5 192 aa16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 UNQ9165/PRO28630Q6UXU0 137 aa16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 LGI3Q8N145 548 aa16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 CACNG8Q8WXS5 425 aa16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 SMAD5-AS1Q9Y6J3 95 aa16.94■□□□□ 0.3
PTCHD3P2-201ENST00000424937 A0A0B4J2A0 478 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 TMEM213A2RRL7 107 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 NAP1L6A6NFF2 107 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 A8MWP6 167 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 F8W735 103 aaPredicted RBP16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 NXPH3O95157 252 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 IL7P13232 177 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 FOLR2P14207 255 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 AARDQ4LEZ3 155 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 SPSB3Q6PJ21 355 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 CENPSQ8N2Z9 138 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 OR52E5Q8NH55 327 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 ATP6V0BQ99437 205 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 SHPKQ9UHJ6 478 aa16.93■□□□□ 0.3
PTCHD3P2-201ENST00000424937 IZUMO1RA6ND01 250 aa16.92■□□□□ 0.3
PTCHD3P2-201ENST00000424937 IGHV3-48P01763 117 aa16.92■□□□□ 0.3
PTCHD3P2-201ENST00000424937 SULT1A3P0DMM9 295 aa16.92■□□□□ 0.3
PTCHD3P2-201ENST00000424937 SULT1A4P0DMN0 295 aa16.92■□□□□ 0.3
PTCHD3P2-201ENST00000424937 RNASE2P10153 161 aaKnown RBP16.92■□□□□ 0.3
PTCHD3P2-201ENST00000424937 LYZL2Q7Z4W2 148 aa16.92■□□□□ 0.3
PTCHD3P2-201ENST00000424937 OR2K2Q8NGT1 345 aa16.92■□□□□ 0.3
PTCHD3P2-201ENST00000424937 CHRDL1Q9BU40 450 aa16.92■□□□□ 0.3
PTCHD3P2-201ENST00000424937 ZNF436Q9C0F3 470 aaPredicted RBP16.92■□□□□ 0.3
PTCHD3P2-201ENST00000424937 SUB1P53999 127 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTCHD3P2-201ENST00000424937 MFAP4P55083 255 aa16.91■□□□□ 0.3
PTCHD3P2-201ENST00000424937 CD300EQ496F6 205 aaPredicted RBP16.91■□□□□ 0.3
PTCHD3P2-201ENST00000424937 NMSQ5H8A3 153 aa16.91■□□□□ 0.3
PTCHD3P2-201ENST00000424937 PALMDQ9NP74 551 aa16.91■□□□□ 0.3
PTCHD3P2-201ENST00000424937 GAR1Q9NY12 217 aaKnown RBP16.91■□□□□ 0.3
PTCHD3P2-201ENST00000424937 CENPXA8MT69 81 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 CEBPZOSA8MTT3 80 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 CBLN1P23435 193 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 ADMP35318 185 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 PPP1R1AQ13522 171 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 TM4SF20Q53R12 229 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 TMEM190Q8WZ59 177 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 UFC1Q9Y3C8 167 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 SELENOKQ9Y6D0 94 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 DNAH9Q9NYC9 4486 aa16.9■□□□□ 0.3
PTCHD3P2-201ENST00000424937 PIGBOS1A0A0B4J2F0 54 aa16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 CORTO00230 105 aa16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 NUPL2O15504 423 aaKnown RBP16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 SMCO1Q147U7 214 aa16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 DEFB114Q30KQ6 69 aa16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 ANKRD55Q3KP44 614 aa16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 TXN2Q99757 166 aa16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 C7orf50Q9BRJ6 194 aaKnown RBP16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 HEYLQ9NQ87 328 aaPredicted RBP16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 TECRQ9NZ01 308 aaKnown RBP16.89■□□□□ 0.29
PTCHD3P2-201ENST00000424937 NDUFA4O00483 81 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 GNG7O60262 68 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 NDUFB6O95139 128 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 SFT2D2O95562 160 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 FCGR2BP31994 310 aaPredicted RBP16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 CNPY1Q3B7I2 92 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 BSXQ3C1V8 233 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 GTSCR1Q86UQ5 136 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 UXS1Q8NBZ7 420 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 C20orf24Q9BUV8 137 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 MLXQ9UH92 298 aa16.88■□□□□ 0.29
PTCHD3P2-201ENST00000424937 COL7A1Q02388 2944 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 IGHV3OR16-8A0A075B7F1 116 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 DUXBA0A1W2PPF3 345 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 A6NHS1 94 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 CTSGP08311 255 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 BTCP35070 178 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 OPRK1P41145 380 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 HTR2BP41595 481 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 ELLP55199 621 aaPredicted RBP16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 PVRIGQ6DKI7 326 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 C11orf87Q6NUJ2 197 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 BTNL8Q6UX41 500 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 MARC2Q969Z3 335 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 CACFD1Q9UGQ2 172 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 FLVCR2Q9UPI3 526 aa16.87■□□□□ 0.29
PTCHD3P2-201ENST00000424937 UBE2MP61081 183 aaKnown RBP16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 RELQ04864 619 aaPredicted RBP16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 TNFRSF9Q07011 255 aa16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 Q8N1Y9 231 aa16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 LRTM2Q8N967 370 aa16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 DUSP18Q8NEJ0 188 aa16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 SLC24A4Q8NFF2 622 aa16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 OR1S1Q8NH92 325 aa16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 WDR89Q96FK6 387 aaPredicted RBP16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 ASCL2Q99929 193 aa16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 DAZ1Q9NQZ3 744 aaKnown RBP16.86■□□□□ 0.29
PTCHD3P2-201ENST00000424937 A0A1B0GU03 582 aa16.85■□□□□ 0.29
PTCHD3P2-201ENST00000424937 NPBWR1P48145 328 aa16.85■□□□□ 0.29
PTCHD3P2-201ENST00000424937 GUCA2BQ16661 112 aa16.85■□□□□ 0.29
PTCHD3P2-201ENST00000424937 HIPK2Q9H2X6 1198 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms