RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 CRIM1Q9NZV1 1036 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 EML5Q05BV3 1969 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 A1L4Q6 167 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 WT1P19544 449 aaPredicted RBP8.19□□□□□ -1.1
USP54-205ENST00000424265 CA6P23280 308 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 GATA2P23769 480 aaPredicted RBP8.19□□□□□ -1.1
USP54-205ENST00000424265 SERF2P84101 59 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 GAGE2BQ13066 116 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 GAGE2EQ4V326 116 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 GAGE2DQ9UEU5 116 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 ANXA10Q9UJ72 324 aa8.19□□□□□ -1.1
USP54-205ENST00000424265 YTHDF2Q9Y5A9 579 aaKnown RBP8.19□□□□□ -1.1
USP54-205ENST00000424265 ZNF318Q5VUA4 2279 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 TAS2R45P59539 299 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 SYT8Q8NBV8 401 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.18□□□□□ -1.1
USP54-205ENST00000424265 TMEM171Q8WVE6 324 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 MS4A6AQ9H2W1 248 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 ZFHX2Q9C0A1 2572 aaPredicted RBP8.18□□□□□ -1.1
USP54-205ENST00000424265 AMY1AP04745 511 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 C1QTNF5Q9BXJ0 243 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 COMMD5Q9GZQ3 224 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 SPTA1P02549 2419 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 UBE2L5PA0A1B0GUS4 154 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 hADV38S2A0JD32 116 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 SPRY3O43610 288 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 VDAC1P21796 283 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 CRYBB3P26998 211 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 GAGE13Q4V321 117 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 ARHGAP5-AS1Q96IT6 56 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 ADTRPQ96IZ2 230 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 FBLN5Q9UBX5 448 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 INSIG2Q9Y5U4 225 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 CFHR2P36980 270 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 ACSM6Q6P461 480 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 SAP30LQ9HAJ7 183 aa8.18□□□□□ -1.1
USP54-205ENST00000424265 CTXND1A0A1B0GTU2 59 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A10PA6NDY2 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A18PA6NE21 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A16PA6NEW6 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A20PA6NIJ5 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A8PA6NJQ4 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A7PA6NKC0 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A22PA8MWA6 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A12PA8MX19 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A5PA8MXJ8 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A23PA8MXZ1 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 LEPROTL1O95214 131 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A15PP0C7V4 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A13PP0C7W8 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A14PP0C7W9 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FAM90A24PP0C7X0 464 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 OR10G9Q8NGN4 311 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 OR10G7Q8NGN6 311 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 IL36GQ9NZH8 169 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 RNF7Q9UBF6 113 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 F2Z2F3 143 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 NDUFB4O95168 129 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 GCSHP23434 173 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 ATP5G2Q06055 141 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 ZNF611Q8N823 705 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 OR4F17Q8NGA8 305 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 GNB1LQ9BYB4 327 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 MAP1LC3AQ9H492 121 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 FOXH1O75593 365 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 ANXA2RQ3ZCQ2 193 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 RAB40CQ96S21 281 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 TSKUQ8WUA8 353 aa8.17□□□□□ -1.1
USP54-205ENST00000424265 NDUFB3O43676 98 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 CELA3BP08861 270 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 CD40P25942 277 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 ETDBQ3ZM63 59 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 NHLRC2Q8NBF2 726 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 VPREB3Q9UKI3 123 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 TNRC6BQ9UPQ9 1833 aaKnown RBP8.16□□□□□ -1.1
USP54-205ENST00000424265 TMEM30CPA0ZSE6 113 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 CHST1O43916 411 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 IL15RAQ13261 267 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 MMD2Q8IY49 270 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 LSM10Q969L4 123 aaKnown RBP8.16□□□□□ -1.1
USP54-205ENST00000424265 ARID1AO14497 2285 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 GATA3P23771 443 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 PSENENQ9NZ42 101 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 FCN3O75636 299 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 PLPPR2Q96GM1 343 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 PRORYQ9H606 182 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 KMT2EQ8IZD2 1858 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 PDCD6O75340 191 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 MEIG1Q5JSS6 88 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 LRRC29Q8WV35 223 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 AMELYQ99218 206 aa8.16□□□□□ -1.1
USP54-205ENST00000424265 KIF26BQ2KJY2 2108 aa8.15□□□□□ -1.1
USP54-205ENST00000424265 TRAV5A0A0B4J249 113 aa8.15□□□□□ -1.1
USP54-205ENST00000424265 SOCS1O15524 211 aa8.15□□□□□ -1.1
USP54-205ENST00000424265 CECR9P0C854 216 aa8.15□□□□□ -1.1
USP54-205ENST00000424265 VSIG8P0DPA2 414 aa8.15□□□□□ -1.1
USP54-205ENST00000424265 TMEM187Q14656 261 aa8.15□□□□□ -1.1
USP54-205ENST00000424265 MSI2Q96DH6 328 aaKnown RBP8.15□□□□□ -1.1
USP54-205ENST00000424265 TMEM126AQ9H061 195 aa8.15□□□□□ -1.1
USP54-205ENST00000424265 GNG12Q9UBI6 72 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms