RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 MSI2Q96DH6 328 aaKnown RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 TMEM140Q9NV12 185 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 MED12LQ86YW9 2145 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 FREM3P0C091 2139 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 SCO2A0A1W2PP80 73 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 PINLYPA6NC86 204 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 SH2D7A6NKC9 451 aaPredicted RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 ASAH2BP0C7U1 165 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 CT45A6P0DMU7 189 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 CT45A5P0DMU8 189 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 CT45A7P0DMV0 189 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 TIMP3P35625 211 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 ZNF121P58317 390 aaPredicted RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 EGR4Q05215 589 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 C3AR1Q16581 482 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 ALKBH6Q3KRA9 238 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 CT45A1Q5HYN5 189 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 RNFT1Q5M7Z0 435 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 FAM69BQ5VUD6 431 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 ZNF525Q8N782 197 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 SYT8Q8NBV8 401 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 CT45A3Q8NHU0 189 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 SSC4DQ8WTU2 575 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 C18orf12Q96KH6 178 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 SSBP3Q9BWW4 388 aaPredicted RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 VCX2Q9H322 139 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 CCL28Q9NRJ3 127 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 TP53TG3Q9ULZ0 132 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 BOKQ9UMX3 212 aaPredicted RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 YTHDF2Q9Y5A9 579 aaKnown RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 SOX21Q9Y651 276 aaPredicted RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 CELSR3Q9NYQ7 3312 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 PIGBOS1A0A0B4J2F0 54 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 C5orf49A4QMS7 147 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 CEACAM18A8MTB9 384 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 C3orf80F5H4A9 247 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 H0Y980 276 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 ENSAO43768 121 aaKnown RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 EFNA2O43921 213 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 SS18L1O75177 396 aaPredicted RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 APOMO95445 188 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 GATA3P23771 443 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 DOK3Q7L591 496 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 TMEM178AQ8NBL3 297 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 ZNF114Q8NC26 417 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 OR10X1Q8NGY0 326 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 ARPC1AQ92747 370 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 NEUROG1Q92886 237 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 ABHD17AQ96GS6 310 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 TAAR6Q96RI8 345 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 TMEM147Q9BVK8 224 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 GNB1LQ9BYB4 327 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 TTTY12Q9BZ98 90 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 NGBQ9NPG2 151 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 SLC7A10Q9NS82 523 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 PIGLQ9Y2B2 252 aa4.07□□□□□ -1.76
ITGB1-205ENST00000423113 LSM4Q9Y4Z0 139 aaKnown RBP4.07□□□□□ -1.76
ITGB1-205ENST00000423113 TRAV36DV7A0A075B6V5 113 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 A0A1W2PPM0 123 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 NPIPB5A8MRT5 1133 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 OR11H12B2RN74 326 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 H3BVH4 76 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 J3QKU1 62 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 TMEM50AO95807 157 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 CGAP01215 116 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 CCL3P10147 92 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 CCL2P13500 99 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 CFHR2P36980 270 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 CYB561P49447 251 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 ZNF137PP52743 207 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 ARG2P78540 354 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 WFDC2Q14508 124 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 LRRC75BQ2VPJ9 315 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 SPINK9Q5DT21 86 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 ZNF562Q6V9R5 426 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 PQLC2Q6ZP29 291 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 SHISA6Q6ZSJ9 500 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 C1QL2Q7Z5L3 287 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 ZDHHC23Q8IYP9 409 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 LRTM2Q8N967 370 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 NHLRC2Q8NBF2 726 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 OR11H1Q8NG94 326 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 OR4F17Q8NGA8 305 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 OR11H2Q8NH07 326 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 ZNF418Q8TF45 676 aaPredicted RBP4.06□□□□□ -1.76
ITGB1-205ENST00000423113 SPXQ9BT56 116 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 COMMD5Q9GZQ3 224 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 NHP2Q9NX24 153 aaKnown RBP4.06□□□□□ -1.76
ITGB1-205ENST00000423113 J3QR06 171 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 TUSC2O75896 110 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 ACTL6BO94805 426 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 MT-ATP6P00846 226 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 FRMD6-AS1P0C7T7 363 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 PLA2G2AP14555 144 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 RPL31P62899 125 aaKnown RBP4.06□□□□□ -1.76
ITGB1-205ENST00000423113 RPL32P62910 135 aaKnown RBP4.06□□□□□ -1.76
ITGB1-205ENST00000423113 TFF3Q07654 80 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 OR1C1Q15619 314 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 GAGE13Q4V321 117 aa4.06□□□□□ -1.76
ITGB1-205ENST00000423113 ABHD17BQ5VST6 288 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms