RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 TOMM20LQ6UXN7 152 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 BEND2Q8NDZ0 799 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 SNHG12Q9BXW3 62 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 MRPL20Q9BYC9 149 aaKnown RBP12.85□□□□□ -0.35
CDH1-202ENST00000422392 DCHS2Q6V1P9 2916 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 RELNP78509 3460 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 RNASE2P10153 161 aaKnown RBP12.85□□□□□ -0.35
CDH1-202ENST00000422392 BAGE3Q86Y29 109 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 BAGE2Q86Y30 109 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 HSPB9Q9BQS6 159 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 TMEM106BQ9NUM4 274 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 DIAPH2-AS1Q14236 149 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 CORO2AQ92828 525 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 LINC00479Q96M42 142 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 RAB9BQ9NP90 201 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 TECRQ9NZ01 308 aaKnown RBP12.84□□□□□ -0.35
CDH1-202ENST00000422392 ZNF257Q9Y2Q1 563 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 RNF114Q9Y508 228 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 TPRP12270 2363 aaKnown RBP12.84□□□□□ -0.35
CDH1-202ENST00000422392 CA1P00915 261 aaPredicted RBP12.84□□□□□ -0.35
CDH1-202ENST00000422392 MGST1P10620 155 aaKnown RBP12.84□□□□□ -0.35
CDH1-202ENST00000422392 SELENOVP59797 346 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 SSTP61278 116 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 C10orf55Q5SWW7 151 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 C1orf194Q5T5A4 169 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 NCOR1P1Q9H4R4 102 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 CHODLQ9H9P2 273 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 TMEM167BQ9NRX6 74 aa12.84□□□□□ -0.35
CDH1-202ENST00000422392 SLC25A10Q9UBX3 287 aaPredicted RBP12.84□□□□□ -0.35
CDH1-202ENST00000422392 FCN3O75636 299 aa12.83□□□□□ -0.35
CDH1-202ENST00000422392 CD40P25942 277 aa12.83□□□□□ -0.35
CDH1-202ENST00000422392 FAM103A1Q9BTL3 118 aaKnown RBP12.83□□□□□ -0.35
CDH1-202ENST00000422392 NAT8BQ9UHF3 227 aa12.83□□□□□ -0.35
CDH1-202ENST00000422392 TPPP2P59282 170 aa12.83□□□□□ -0.36
CDH1-202ENST00000422392 C1orf185Q5T7R7 199 aa12.83□□□□□ -0.36
CDH1-202ENST00000422392 CEACAM4O75871 244 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 IGLV2-8P01709 118 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 CD69Q07108 199 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 C2orf83Q53S99 150 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 MRPL54Q6P161 138 aaKnown RBP12.82□□□□□ -0.36
CDH1-202ENST00000422392 SFXN3Q9BWM7 321 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 LY96Q9Y6Y9 160 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 ZFHX2Q9C0A1 2572 aaPredicted RBP12.82□□□□□ -0.36
CDH1-202ENST00000422392 KIR2DL5BA0A0G2JN68 375 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 KIR2DL5BA0A0G2JPC4 375 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 OR5G3P0C626 314 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 IRF2P14316 349 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 LBHQ53QV2 105 aaPredicted RBP12.82□□□□□ -0.36
CDH1-202ENST00000422392 KIR2DL5AQ8N109 375 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 VN1R17PQ8TDU5 208 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 SLC25A33Q9BSK2 321 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 SAMD10Q9BYL1 202 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 GNB4Q9HAV0 340 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 SERTAD4Q9NUC0 356 aa12.82□□□□□ -0.36
CDH1-202ENST00000422392 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 PYYP10082 97 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 TIGITQ495A1 244 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 TPTE2P1Q5T6R2 138 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 SLC35E1Q96K37 410 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 COMMD5Q9GZQ3 224 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 BET1LQ9NYM9 111 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 hADV38S2A0JD32 116 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 TNFSF4P23510 183 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 LHFPL4Q7Z7J7 247 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 FAM168AQ92567 244 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 RCHY1Q96PM5 261 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 SSBP3Q9BWW4 388 aaPredicted RBP12.81□□□□□ -0.36
CDH1-202ENST00000422392 LINC00574Q9H8X3 128 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 PAM16Q9Y3D7 125 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 APC2O95996 2303 aa12.81□□□□□ -0.36
CDH1-202ENST00000422392 TRAV9-1A0A075B6T8 112 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 NUTF2P61970 127 aaKnown RBP12.8□□□□□ -0.36
CDH1-202ENST00000422392 IBA57Q5T440 356 aaKnown RBP12.8□□□□□ -0.36
CDH1-202ENST00000422392 ZNF705AQ6ZN79 300 aaPredicted RBP12.8□□□□□ -0.36
CDH1-202ENST00000422392 ZNF833PQ6ZTB9 187 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 OR5AU1Q8NGC0 362 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 SLC25A2Q9BXI2 301 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 H0YJW9 148 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 TM4SF5O14894 197 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 C8orf88P0DMB2 117 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 UBE2L3P68036 154 aaKnown RBP12.8□□□□□ -0.36
CDH1-202ENST00000422392 CX3CL1P78423 397 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 OR1L8Q8NGR8 309 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 H1FXQ92522 213 aaKnown RBP12.8□□□□□ -0.36
CDH1-202ENST00000422392 FNDC4Q9H6D8 234 aaPredicted RBP12.8□□□□□ -0.36
CDH1-202ENST00000422392 NDUFA4L2Q9NRX3 87 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
CDH1-202ENST00000422392 PLAUP00749 431 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 REG1AP05451 166 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 TAS2R45P59539 299 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 RPL8P62917 257 aaKnown RBP12.79□□□□□ -0.36
CDH1-202ENST00000422392 PAFAH1B2P68402 229 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 WT1-ASQ06250 92 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 WFDC8Q8IUA0 241 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 FAM167A-AS1Q96KT0 104 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 MRPL36Q9P0J6 103 aaKnown RBP12.79□□□□□ -0.36
CDH1-202ENST00000422392 TRAV34A0A0B4J273 112 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms