RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 HOXA1P49639 335 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-204ENST00000422344 ELLP55199 621 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-204ENST00000422344 FAM219AQ8IW50 185 aa16.54■□□□□ 0.24
TRAF4-204ENST00000422344 PINX1Q96BK5 328 aaKnown RBP16.54■□□□□ 0.24
TRAF4-204ENST00000422344 ZNF436Q9C0F3 470 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-204ENST00000422344 C19orf73Q9NVV2 129 aa16.54■□□□□ 0.24
TRAF4-204ENST00000422344 CRYM-AS1A6NIL9 109 aa16.53■□□□□ 0.24
TRAF4-204ENST00000422344 CDS2O95674 445 aa16.53■□□□□ 0.24
TRAF4-204ENST00000422344 AP3S2P59780 193 aa16.53■□□□□ 0.24
TRAF4-204ENST00000422344 MUC7Q8TAX7 377 aa16.53■□□□□ 0.24
TRAF4-204ENST00000422344 GLYATL2Q8WU03 294 aa16.53■□□□□ 0.24
TRAF4-204ENST00000422344 TMEM190Q8WZ59 177 aa16.53■□□□□ 0.24
TRAF4-204ENST00000422344 RBPMSQ93062 196 aaKnown RBP16.53■□□□□ 0.24
TRAF4-204ENST00000422344 WDR89Q96FK6 387 aaPredicted RBP16.53■□□□□ 0.24
TRAF4-204ENST00000422344 NEURL2Q9BR09 285 aa16.53■□□□□ 0.24
TRAF4-204ENST00000422344 RBM38Q9H0Z9 239 aaKnown RBP16.53■□□□□ 0.24
TRAF4-204ENST00000422344 MRPL27Q9P0M9 148 aaKnown RBP16.53■□□□□ 0.24
TRAF4-204ENST00000422344 KCNIP3Q9Y2W7 256 aa16.53■□□□□ 0.24
TRAF4-204ENST00000422344 SELENOKQ9Y6D0 94 aa16.53■□□□□ 0.24
TRAF4-204ENST00000422344 ZNF785A8K8V0 405 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 ZNF701M0R085 212 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-204ENST00000422344 NDUFA4O00483 81 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 NUPL2O15504 423 aaKnown RBP16.52■□□□□ 0.24
TRAF4-204ENST00000422344 MT-CO2P00403 227 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 SUB1P53999 127 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRAF4-204ENST00000422344 MFAP4P55083 255 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 CASC10Q5T4H9 136 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 TMEM268Q5VZI3 342 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 BTNL8Q6UX41 500 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 CHRDL1Q9BU40 450 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 C20orf24Q9BUV8 137 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 MLXQ9UH92 298 aa16.52■□□□□ 0.24
TRAF4-204ENST00000422344 A0A0G2JRQ6 117 aa16.51■□□□□ 0.23
TRAF4-204ENST00000422344 I3L2K1 104 aa16.51■□□□□ 0.23
TRAF4-204ENST00000422344 ETV6P41212 452 aa16.51■□□□□ 0.23
TRAF4-204ENST00000422344 SELENOHQ8IZQ5 122 aaKnown RBP16.51■□□□□ 0.23
TRAF4-204ENST00000422344 TMEM61Q8N0U2 210 aa16.51■□□□□ 0.23
TRAF4-204ENST00000422344 TOMM5Q8N4H5 51 aa16.51■□□□□ 0.23
TRAF4-204ENST00000422344 RCHY1Q96PM5 261 aa16.51■□□□□ 0.23
TRAF4-204ENST00000422344 TXN2Q99757 166 aa16.51■□□□□ 0.23
TRAF4-204ENST00000422344 DAZ1Q9NQZ3 744 aaKnown RBP16.51■□□□□ 0.23
TRAF4-204ENST00000422344 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.51■□□□□ 0.23
TRAF4-204ENST00000422344 V9GYH0 126 aa16.51■□□□□ 0.23
TRAF4-204ENST00000422344 F8W735 103 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-204ENST00000422344 INS-IGF2F8WCM5 200 aa16.5■□□□□ 0.23
TRAF4-204ENST00000422344 RELQ04864 619 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-204ENST00000422344 RBPMS2Q6ZRY4 209 aaKnown RBP16.5■□□□□ 0.23
TRAF4-204ENST00000422344 SLC16A13Q7RTY0 426 aa16.5■□□□□ 0.23
TRAF4-204ENST00000422344 LHFPL5Q8TAF8 219 aa16.5■□□□□ 0.23
TRAF4-204ENST00000422344 SACSQ9NZJ4 4579 aa16.49■□□□□ 0.23
TRAF4-204ENST00000422344 CORTO00230 105 aa16.49■□□□□ 0.23
TRAF4-204ENST00000422344 GNG7O60262 68 aa16.49■□□□□ 0.23
TRAF4-204ENST00000422344 SCAF4O95104 1147 aaKnown RBP16.49■□□□□ 0.23
TRAF4-204ENST00000422344 CD7P09564 240 aa16.49■□□□□ 0.23
TRAF4-204ENST00000422344 C8orf88P0DMB2 117 aa16.49■□□□□ 0.23
TRAF4-204ENST00000422344 AKR1C4P17516 323 aa16.49■□□□□ 0.23
TRAF4-204ENST00000422344 ADMP35318 185 aa16.49■□□□□ 0.23
TRAF4-204ENST00000422344 KLF9Q13886 244 aaPredicted RBP16.49■□□□□ 0.23
TRAF4-204ENST00000422344 SPANXN2Q5MJ10 180 aa16.49■□□□□ 0.23
TRAF4-204ENST00000422344 TRIM63Q969Q1 353 aa16.49■□□□□ 0.23
TRAF4-204ENST00000422344 TRAV25A0A0B4J276 109 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 YIF1AO95070 293 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 IGHV3-48P01763 117 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 CTSGP08311 255 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 ANXA3P12429 323 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 FCGR2BP31994 310 aaPredicted RBP16.48■□□□□ 0.23
TRAF4-204ENST00000422344 SPCS3P61009 180 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 ANKRD55Q3KP44 614 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 DUSP18Q8NEJ0 188 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 OR52B4Q8NGK2 314 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 CACNG5Q9UF02 275 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 TMEM56-RWDD3S4R434 201 aa16.48■□□□□ 0.23
TRAF4-204ENST00000422344 NPBWR1P48145 328 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 ZNF79Q15937 498 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 Q6ZRM9 215 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 CCDC190Q86UF4 302 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 OR52E5Q8NH55 327 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 IL22RA2Q969J5 263 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 TMEM230Q96A57 120 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 GPR146Q96CH1 333 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 GALNT14Q96FL9 552 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 TM2D3Q9BRN9 247 aa16.47■□□□□ 0.23
TRAF4-204ENST00000422344 IGHV3OR16-8A0A075B7F1 116 aa16.46■□□□□ 0.23
TRAF4-204ENST00000422344 C15orf62A8K5M9 175 aa16.46■□□□□ 0.23
TRAF4-204ENST00000422344 OR11H12B2RN74 326 aa16.46■□□□□ 0.23
TRAF4-204ENST00000422344 K7EMT4 169 aa16.46■□□□□ 0.23
TRAF4-204ENST00000422344 RNASE2P10153 161 aaKnown RBP16.46■□□□□ 0.23
TRAF4-204ENST00000422344 TMEM187Q14656 261 aa16.46■□□□□ 0.23
TRAF4-204ENST00000422344 DEFB125Q8N687 156 aa16.46■□□□□ 0.23
TRAF4-204ENST00000422344 CEBPZOSA8MTT3 80 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 ZNF207O43670 478 aaKnown RBP16.45■□□□□ 0.22
TRAF4-204ENST00000422344 INPP1P49441 399 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 SRPXP78539 464 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 HAGHQ16775 308 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 AARDQ4LEZ3 155 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 LAMTOR1Q6IAA8 161 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 TMED4Q7Z7H5 227 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 DEDD2Q8WXF8 326 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 SPATA25Q9BR10 227 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 HEYLQ9NQ87 328 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms