RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 PPP5CP53041 499 aa13.24□□□□□ -0.29
HDLBP-208ENST00000422080 SPCS2Q15005 226 aa13.24□□□□□ -0.29
HDLBP-208ENST00000422080 IZUMO4Q1ZYL8 232 aa13.24□□□□□ -0.29
HDLBP-208ENST00000422080 OR13C8Q8NGS7 320 aa13.24□□□□□ -0.29
HDLBP-208ENST00000422080 ZNF414Q96IQ9 312 aa13.24□□□□□ -0.29
HDLBP-208ENST00000422080 NXF2Q9GZY0 626 aaKnown RBP13.24□□□□□ -0.29
HDLBP-208ENST00000422080 RABL2AQ9UBK7 228 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-208ENST00000422080 RABL2BQ9UNT1 228 aa13.24□□□□□ -0.29
HDLBP-208ENST00000422080 STARD9Q9P2P6 4700 aa13.24□□□□□ -0.29
HDLBP-208ENST00000422080 IGHV3OR16-8A0A075B7F1 116 aa13.23□□□□□ -0.29
HDLBP-208ENST00000422080 LCE6AA0A183 80 aa13.23□□□□□ -0.29
HDLBP-208ENST00000422080 UCP1P25874 307 aa13.23□□□□□ -0.29
HDLBP-208ENST00000422080 MEF2DQ14814 521 aa13.23□□□□□ -0.29
HDLBP-208ENST00000422080 TRIM16LQ309B1 348 aa13.23□□□□□ -0.29
HDLBP-208ENST00000422080 SCGB2B2Q4G0G5 96 aa13.23□□□□□ -0.29
HDLBP-208ENST00000422080 OR10C1Q96KK4 312 aa13.23□□□□□ -0.29
HDLBP-208ENST00000422080 OR4C46A6NHA9 309 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 ST8SIA3O43173 380 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 ZNF207O43670 478 aaKnown RBP13.22□□□□□ -0.29
HDLBP-208ENST00000422080 IFNA17P01571 189 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 SNCAP37840 140 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 SP6Q3SY56 376 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 CLVS1Q8IUQ0 354 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-208ENST00000422080 SLC35G3Q8N808 338 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 TMEM116Q8NCL8 245 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 MARCH1Q8TCQ1 289 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 RAB2BQ8WUD1 216 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 SMIM4Q8WVI0 70 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 RRNAD1Q96FB5 475 aaKnown RBP13.22□□□□□ -0.29
HDLBP-208ENST00000422080 BCL7BQ9BQE9 202 aa13.22□□□□□ -0.29
HDLBP-208ENST00000422080 IGHV7-4-1A0A0J9YVY3 117 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 CHEK1O14757 476 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 CTDSPLO15194 276 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 GNG7O60262 68 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 YIF1AO95070 293 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 NPBWR1P48145 328 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 SUB1P53999 127 aaKnown RBP eCLIP13.21□□□□□ -0.29
HDLBP-208ENST00000422080 TMBIM6P55061 237 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 SURF2Q15527 256 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-208ENST00000422080 SPINK9Q5DT21 86 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 DUSP18Q8NEJ0 188 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 PINX1Q96BK5 328 aaKnown RBP13.21□□□□□ -0.29
HDLBP-208ENST00000422080 LYSTQ99698 3801 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 OVOL2Q9BRP0 275 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 PDCD10Q9BUL8 212 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 RHPN1-AS1Q9BWJ2 59 aa13.21□□□□□ -0.29
HDLBP-208ENST00000422080 TRAV14DV4A0A0A6YYC5 116 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 DISC1C4P0D8 188 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 CDS2O95674 445 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 IGHV3-48P01763 117 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 ETV6P41212 452 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 APOC4P55056 127 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 FAM219AQ8IW50 185 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 DIRAS2Q96HU8 199 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 RNF2Q99496 336 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 RTBDNQ9BSG5 229 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-208ENST00000422080 CCDC59Q9P031 241 aaKnown RBP13.2□□□□□ -0.3
HDLBP-208ENST00000422080 UBQLN2Q9UHD9 624 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
HDLBP-208ENST00000422080 RYR2Q92736 4967 aa13.2□□□□□ -0.3
HDLBP-208ENST00000422080 CORTO00230 105 aa13.19□□□□□ -0.3
HDLBP-208ENST00000422080 UBE2CO00762 179 aa13.19□□□□□ -0.3
HDLBP-208ENST00000422080 CMC4P56277 68 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-208ENST00000422080 ODF3L2Q3SX64 289 aa13.19□□□□□ -0.3
HDLBP-208ENST00000422080 Q6ZWC4 215 aa13.19□□□□□ -0.3
HDLBP-208ENST00000422080 DYNC2LI1Q8TCX1 351 aa13.19□□□□□ -0.3
HDLBP-208ENST00000422080 TMEM222Q9H0R3 208 aa13.19□□□□□ -0.3
HDLBP-208ENST00000422080 ENY2Q9NPA8 101 aa13.19□□□□□ -0.3
HDLBP-208ENST00000422080 TP53TG1Q9Y2A0 90 aa13.19□□□□□ -0.3
HDLBP-208ENST00000422080 DNAH1Q9P2D7 4330 aa13.19□□□□□ -0.3
HDLBP-208ENST00000422080 KIR2DL5BA0A0G2JN68 375 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 KIR2DL5BA0A0G2JPC4 375 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 A0A0G2JRQ6 117 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 TEX13DA0A0J9YY54 714 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-208ENST00000422080 CD5P06127 495 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 OR5AC1P0C628 307 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 AKAIN1P0CW23 69 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 RNASE2P10153 161 aaKnown RBP13.18□□□□□ -0.3
HDLBP-208ENST00000422080 HOXA1P49639 335 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-208ENST00000422080 DHODHQ02127 395 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 IL18Q14116 193 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 AARDQ4LEZ3 155 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 FAAP20Q6NZ36 180 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 TOMM20LQ6UXN7 152 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 Q6ZRM9 215 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 KIR2DL5AQ8N109 375 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 OR52E5Q8NH55 327 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 KIR2DL5BQ8NHK3 375 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 RNASE11Q8TAA1 199 aaKnown RBP13.18□□□□□ -0.3
HDLBP-208ENST00000422080 GLYATL2Q8WU03 294 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 GINS3Q9BRX5 216 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 NAA60Q9H7X0 242 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-208ENST00000422080 GPR132Q9UNW8 380 aa13.18□□□□□ -0.3
HDLBP-208ENST00000422080 TMEM50AO95807 157 aa13.17□□□□□ -0.3
HDLBP-208ENST00000422080 BMI1P35226 326 aa13.17□□□□□ -0.3
HDLBP-208ENST00000422080 RPL5P46777 297 aaKnown RBP13.17□□□□□ -0.3
HDLBP-208ENST00000422080 SPCS3P61009 180 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms