RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 NDUFB8O95169 186 aa13.61□□□□□ -0.23
LINC00271-201ENST00000421378 IGHV3-11P01762 117 aa13.61□□□□□ -0.23
LINC00271-201ENST00000421378 RPP30P78346 268 aaKnown RBP13.61□□□□□ -0.23
LINC00271-201ENST00000421378 ATP5G2Q06055 141 aa13.61□□□□□ -0.23
LINC00271-201ENST00000421378 NSUN5P1Q3KNT7 163 aa13.61□□□□□ -0.23
LINC00271-201ENST00000421378 LRRC37A5PQ49AS3 106 aa13.61□□□□□ -0.23
LINC00271-201ENST00000421378 NOXA1Q86UR1 476 aa13.61□□□□□ -0.23
LINC00271-201ENST00000421378 PPP1R1CQ8WVI7 109 aa13.61□□□□□ -0.23
LINC00271-201ENST00000421378 C4orf3Q8WVX3 66 aa13.61□□□□□ -0.23
LINC00271-201ENST00000421378 PINX1Q96BK5 328 aaKnown RBP13.61□□□□□ -0.23
LINC00271-201ENST00000421378 GNB4Q9HAV0 340 aa13.61□□□□□ -0.23
LINC00271-201ENST00000421378 ADARB2-AS1A8MUL3 147 aa13.6□□□□□ -0.23
LINC00271-201ENST00000421378 H3BP45 60 aa13.6□□□□□ -0.23
LINC00271-201ENST00000421378 ATP5IP56385 69 aaPredicted RBP13.6□□□□□ -0.23
LINC00271-201ENST00000421378 SPANXN5Q5MJ07 72 aa13.6□□□□□ -0.23
LINC00271-201ENST00000421378 PVRIGQ6DKI7 326 aa13.6□□□□□ -0.23
LINC00271-201ENST00000421378 C18orf65Q6ZTR6 163 aa13.6□□□□□ -0.23
LINC00271-201ENST00000421378 TMEM170AQ8WVE7 144 aa13.6□□□□□ -0.23
LINC00271-201ENST00000421378 CXorf58Q96LI9 332 aa13.6□□□□□ -0.23
LINC00271-201ENST00000421378 OR5B12Q96R08 314 aa13.6□□□□□ -0.23
LINC00271-201ENST00000421378 L7N2F9 121 aa13.59□□□□□ -0.23
LINC00271-201ENST00000421378 TMEM50AO95807 157 aa13.59□□□□□ -0.23
LINC00271-201ENST00000421378 PVALBP20472 110 aaPredicted RBP13.59□□□□□ -0.23
LINC00271-201ENST00000421378 TAS2R30P59541 319 aa13.59□□□□□ -0.23
LINC00271-201ENST00000421378 VAMP2P63027 116 aa13.59□□□□□ -0.23
LINC00271-201ENST00000421378 EXOSC2Q13868 293 aaKnown RBP13.59□□□□□ -0.23
LINC00271-201ENST00000421378 SPATA3Q8NHX4 192 aa13.59□□□□□ -0.23
LINC00271-201ENST00000421378 WDR89Q96FK6 387 aaPredicted RBP13.59□□□□□ -0.23
LINC00271-201ENST00000421378 SMIM8Q96KF7 97 aa13.59□□□□□ -0.23
LINC00271-201ENST00000421378 ZNF436Q9C0F3 470 aaPredicted RBP13.59□□□□□ -0.23
LINC00271-201ENST00000421378 PSENENQ9NZ42 101 aa13.59□□□□□ -0.23
LINC00271-201ENST00000421378 PAIP2BQ9ULR5 123 aaKnown RBP13.59□□□□□ -0.23
LINC00271-201ENST00000421378 MFSD2BA6NFX1 497 aa13.58□□□□□ -0.23
LINC00271-201ENST00000421378 C15orf62A8K5M9 175 aa13.58□□□□□ -0.23
LINC00271-201ENST00000421378 K7EIM0 57 aa13.58□□□□□ -0.23
LINC00271-201ENST00000421378 LGALS1P09382 135 aaKnown RBP13.58□□□□□ -0.23
LINC00271-201ENST00000421378 OPRK1P41145 380 aa13.58□□□□□ -0.23
LINC00271-201ENST00000421378 RAB11AP62491 216 aa13.58□□□□□ -0.23
LINC00271-201ENST00000421378 C8orf86Q6ZUL3 223 aa13.58□□□□□ -0.23
LINC00271-201ENST00000421378 RNASEH2CQ8TDP1 164 aaKnown RBP13.58□□□□□ -0.23
LINC00271-201ENST00000421378 ASB13Q8WXK3 278 aa13.58□□□□□ -0.23
LINC00271-201ENST00000421378 EEF1AKMT3Q96AZ1 226 aa13.58□□□□□ -0.23
LINC00271-201ENST00000421378 STRAPQ9Y3F4 350 aaKnown RBP13.58□□□□□ -0.23
LINC00271-201ENST00000421378 S4R3C0 116 aa13.58□□□□□ -0.23
LINC00271-201ENST00000421378 IGHV3-21A0A0B4J1V1 117 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 I3L2K1 104 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 I3L521 148 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 TSC22D2O75157 780 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 DEDDO75618 318 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 MT-CO2P00403 227 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 IFNA4P05014 189 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 OR8U8P0C7N1 319 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 PET100P0DJ07 73 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 PAX9P55771 341 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 ZNF343Q6P1L6 599 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 VN1R17PQ8TDU5 208 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 SCARB1Q8WTV0 552 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 OR4C12Q96R67 309 aa13.58□□□□□ -0.24
LINC00271-201ENST00000421378 TRBV7-1A0A0A6YYK4 115 aa13.57□□□□□ -0.24
LINC00271-201ENST00000421378 IGHV3-23P01764 117 aa13.57□□□□□ -0.24
LINC00271-201ENST00000421378 RLN2P04090 185 aa13.57□□□□□ -0.24
LINC00271-201ENST00000421378 GIPP09681 153 aaPredicted RBP13.57□□□□□ -0.24
LINC00271-201ENST00000421378 RUNX1Q01196 453 aa13.57□□□□□ -0.24
LINC00271-201ENST00000421378 DEFB136Q30KP8 78 aa13.57□□□□□ -0.24
LINC00271-201ENST00000421378 CCDC140Q96MF4 163 aa13.57□□□□□ -0.24
LINC00271-201ENST00000421378 ANK2Q01484 3957 aa13.56□□□□□ -0.24
LINC00271-201ENST00000421378 MPC2O95563 127 aa13.56□□□□□ -0.24
LINC00271-201ENST00000421378 CAV2P51636 162 aa13.56□□□□□ -0.24
LINC00271-201ENST00000421378 FAM209BQ5JX69 171 aa13.56□□□□□ -0.24
LINC00271-201ENST00000421378 ZNF502Q8TBZ5 544 aa13.56□□□□□ -0.24
LINC00271-201ENST00000421378 C11orf1Q9H5F2 150 aa13.56□□□□□ -0.24
LINC00271-201ENST00000421378 FNDC4Q9H6D8 234 aaPredicted RBP13.56□□□□□ -0.24
LINC00271-201ENST00000421378 C21orf62Q9NYP8 219 aa13.56□□□□□ -0.24
LINC00271-201ENST00000421378 RPS10-NUDT3A0A1W2PQS6 291 aa13.55□□□□□ -0.24
LINC00271-201ENST00000421378 ANKRD34BA5PLL1 514 aa13.55□□□□□ -0.24
LINC00271-201ENST00000421378 M0QZ24 198 aa13.55□□□□□ -0.24
LINC00271-201ENST00000421378 IGHV3-48P01763 117 aa13.55□□□□□ -0.24
LINC00271-201ENST00000421378 BCAP31P51572 246 aa13.55□□□□□ -0.24
LINC00271-201ENST00000421378 ETV3LQ6ZN32 361 aa13.55□□□□□ -0.24
LINC00271-201ENST00000421378 OR4F17Q8NGA8 305 aa13.55□□□□□ -0.24
LINC00271-201ENST00000421378 OR4F4Q96R69 305 aa13.55□□□□□ -0.24
LINC00271-201ENST00000421378 OR5AC2Q9NZP5 309 aa13.55□□□□□ -0.24
LINC00271-201ENST00000421378 hCG_2014768A0A024R1R8 64 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.54□□□□□ -0.24
LINC00271-201ENST00000421378 E5RGE8 158 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 RAP2BP61225 183 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 ETFRF1Q6IPR1 90 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 TMEM14EPQ6UXP3 125 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 CLEC19AQ6UXS0 136 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 UBAC2Q8NBM4 344 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 OR11H1Q8NG94 326 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 RANGRFQ9HD47 186 aaPredicted RBP13.54□□□□□ -0.24
LINC00271-201ENST00000421378 LYRM2Q9NU23 88 aaPredicted RBP13.54□□□□□ -0.24
LINC00271-201ENST00000421378 PEF1Q9UBV8 284 aaKnown RBP13.54□□□□□ -0.24
LINC00271-201ENST00000421378 H0YIZ8 118 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 TRBV12-3P01733 135 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 METTL15P1P0C7V9 234 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 GPR183P32249 361 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 CD69Q07108 199 aa13.54□□□□□ -0.24
LINC00271-201ENST00000421378 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms