RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 TRIM40Q6P9F5 258 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 HRCT1Q6UXD1 115 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 TBC1D26Q86UD7 250 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 SLC25A42Q86VD7 318 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 PTGR2Q8N8N7 351 aaPredicted RBP3.39□□□□□ -1.87
PTPN22-202ENST00000420377 STAG3L4Q8TBR4 150 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 SCGB1C1Q8TD33 95 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 ARPC1AQ92747 370 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 NUS1Q96E22 293 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 COX14Q96I36 57 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 RARRES2Q99969 163 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 C5orf66Q9H5L9 145 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 RETNQ9HD89 108 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 GNG12Q9UBI6 72 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 PEMTQ9UBM1 199 aa3.39□□□□□ -1.87
PTPN22-202ENST00000420377 RANBP2P49792 3224 aaKnown RBP3.39□□□□□ -1.87
PTPN22-202ENST00000420377 EP300Q09472 2414 aaPredicted RBP3.39□□□□□ -1.87
PTPN22-202ENST00000420377 NINQ8N4C6 2090 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 TRAV9-1A0A075B6T8 112 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 SYS1-DBNDD2H3BUS1 97 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 M0R129 80 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 PLPP1O14494 284 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 IGHMP01871 453 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 SLC25A5P05141 298 aaKnown RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 CRISP2P16562 243 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 RBMXP38159 391 aaKnown RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 NMUP48645 174 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 EFNB2P52799 333 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 ZNF85Q03923 595 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 LTBQ06643 244 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 HES1Q14469 280 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 ZNF141Q15928 474 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 ZNF678Q5SXM1 525 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 CYP2G1PQ6ZSU1 146 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 STPG3Q8N7X2 389 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 ZFP62Q8NB50 900 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 MRPL30Q8TCC3 161 aaKnown RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 KCNS1Q96KK3 526 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 C9orf85Q96MD7 179 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 JPT2Q9H910 190 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 C20orf141Q9NUB4 165 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 PKIGQ9Y2B9 76 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 URB1O60287 2271 aaKnown RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 DAPL1A0PJW8 107 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 C5orf49A4QMS7 147 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 ZNF736B4DX44 427 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 H3BMG7 143 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 CRXO43186 299 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 MPDU1O75352 247 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 GATA2P23769 480 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 PPP1CCP36873 323 aaKnown RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 ACVRL1P37023 503 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 LEPP41159 167 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 ASIPP42127 132 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 DEFB133Q30KQ1 61 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 SYT14P1Q58G82 188 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 SPRNQ5BIV9 151 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 ZNF322Q6U7Q0 402 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 FAM231DQ6ZW35 169 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 MSRB3Q8IXL7 192 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 OTOSQ8NHW6 89 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 BORCS7Q96B45 105 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 ATP5SQ99766 215 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 FAM173AQ9BQD7 235 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 CHST6Q9GZX3 395 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 TMEM191AQ9H0A3 160 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 IKZF5Q9H5V7 419 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 C1orf123Q9NWV4 160 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 TVP23BQ9NYZ1 205 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 TAAR2Q9P1P5 351 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 VSIG4Q9Y279 399 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 RCL1Q9Y2P8 373 aaKnown RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 RNF114Q9Y508 228 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 MPC1Q9Y5U8 109 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 IGSF10Q6WRI0 2623 aa3.38□□□□□ -1.87
PTPN22-202ENST00000420377 BAZ2BQ9UIF8 2168 aaKnown RBP3.38□□□□□ -1.87
PTPN22-202ENST00000420377 TRBV20-1A0A075B6N2 111 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 TMED7-TICAM2A0A0A6YYA0 188 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 TRAV1-1A0A0B4J248 108 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 TRAV5A0A0B4J249 113 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 LOC102723971A0A1B0GUV8 181 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 CEACAM18A8MTB9 384 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 APOMO95445 188 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 NAPSAO96009 420 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 OXTP01178 125 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 PRH1P02810 166 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 ACRV1P26436 265 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 LOXP28300 417 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-202ENST00000420377 SSR4P51571 173 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 RPS24P62847 133 aaKnown RBP3.37□□□□□ -1.87
PTPN22-202ENST00000420377 HERVK_113P63121 156 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 CLEC12BQ2HXU8 276 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 ETDBQ3ZM63 59 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 NCBP2-AS2Q69YL0 99 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 SLC35E4Q6ICL7 350 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 AMTNQ6UX39 209 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 C1orf158Q8N1D5 194 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 ZNF114Q8NC26 417 aa3.37□□□□□ -1.87
PTPN22-202ENST00000420377 GJC3Q8NFK1 279 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms