RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 GNB1P62873 340 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 UBA52P62987 128 aaKnown RBP11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 EXOSC2Q13868 293 aaKnown RBP11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 TEX261Q6UWH6 196 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 BAP18Q8IXM2 172 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 Q8N2B8 174 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 SPATA3Q8NHX4 192 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 C22orf15Q8WYQ4 148 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 HSPB9Q9BQS6 159 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 SOX15O60248 233 aa11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 MPDU1O75352 247 aa11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 FBXO24O75426 580 aa11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 TPT1P13693 172 aaKnown RBP11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 SLC38A11Q08AI6 406 aa11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 SIGLECL1Q8N7X8 197 aa11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 BSCL2Q96G97 398 aaPredicted RBP11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 GINS3Q9BRX5 216 aa11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 WFDC1Q9HC57 220 aa11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 UQCC1Q9NVA1 299 aa11.23□□□□□ -0.61
SHMT1P1-201ENST00000419974 TET2Q6N021 2002 aaPredicted RBP11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 H3BUA1 57 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 IFNA4P05014 189 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 HIST1H1BP16401 226 aaKnown RBP11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 SRD5A1P18405 259 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 IFITM2Q01629 132 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 CD69Q07108 199 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 LY6EQ16553 131 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 RPL7L1Q6DKI1 246 aaKnown RBP11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 ETFRF1Q6IPR1 90 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 EIF5AL1Q6IS14 154 aaKnown RBP11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 TMEM217Q8N7C4 229 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 FAM110DQ8TAY7 271 aaPredicted RBP11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 ST8SIA2Q92186 375 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 ZNF471Q9BX82 626 aaPredicted RBP11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 WNT10AQ9GZT5 417 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 NPVFQ9HCQ7 196 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 FBXO7Q9Y3I1 522 aa11.22□□□□□ -0.61
SHMT1P1-201ENST00000419974 IGLV11-55A0A075B6I3 123 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 RPS10-NUDT3A0A1W2PQS6 291 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 AP4M1O00189 453 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 ATP6V0E1O15342 81 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 SEC11BP0C7V7 166 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 ZNF767PQ75MW2 155 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 LILRB2Q8N423 598 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 TMEM116Q8NCL8 245 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 GNPNAT1Q96EK6 184 aaPredicted RBP11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 ATP6V0BQ99437 205 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 NPFFR1Q9GZQ6 430 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 WDR61Q9GZS3 305 aaKnown RBP11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 THYN1Q9P016 225 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 WDR83OSQ9Y284 106 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 LSM4Q9Y4Z0 139 aaKnown RBP11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 DMRT1Q9Y5R6 373 aa11.21□□□□□ -0.61
SHMT1P1-201ENST00000419974 TRBV9A0A0B4J1U6 114 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 TMEM89A2RUT3 159 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 IFNA7P01567 189 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 IFNA5P01569 189 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 SPP1P10451 314 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 PPIFP30405 207 aaKnown RBP11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 FCGR2BP31994 310 aaPredicted RBP11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 MFAP2P55001 183 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 HILS1P60008 231 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 BLCAPP62952 87 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 OR8G2PQ6IF36 304 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 IL17RELQ6ZVW7 336 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 TMEM144Q7Z5S9 345 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 SLC35E3Q7Z769 313 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 ZNF680Q8NEM1 530 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 LFNGQ8NES3 379 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 FANCD2OSQ96PS1 177 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 PSMG3Q9BT73 122 aaPredicted RBP11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 PRSS22Q9GZN4 317 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 TIMM9Q9Y5J7 89 aa11.2□□□□□ -0.62
SHMT1P1-201ENST00000419974 I3L2K1 104 aa11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 RNASE1P07998 156 aaKnown RBP11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 CFHR3Q02985 330 aa11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 CLINT1Q14677 625 aa11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 ARSJQ5FYB0 599 aaPredicted RBP11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 ZNF418Q8TF45 676 aaPredicted RBP11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 ABHD5Q8WTS1 349 aa11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 FAM103A1Q9BTL3 118 aaKnown RBP11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 SMIM3Q9BZL3 60 aa11.19□□□□□ -0.62
SHMT1P1-201ENST00000419974 TRAV41A0A0B4J266 112 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 LINC01548A6NM66 108 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 TRIM77I1YAP6 450 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 SERF2P84101 59 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 GAMTQ14353 236 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 OR2G3Q8NGZ4 309 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 VN1R17PQ8TDU5 208 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 SCARB1Q8WTV0 552 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 TAF15Q92804 592 aaKnown RBP eCLIP11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 FNDC4Q9H6D8 234 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms