RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ZNF256Q9Y2P7 627 aaPredicted RBP5.28□□□□□ -1.56
HMGN1-205ENST00000419378 SORL1Q92673 2214 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 IGLV11-55A0A075B6I3 123 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.27□□□□□ -1.57
HMGN1-205ENST00000419378 IGLC7A0M8Q6 106 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 CBY3A6NI87 242 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 CTDSPLO15194 276 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 RAB3DO95716 219 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 DHFRP00374 187 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 KRASP01116 189 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 REG1AP05451 166 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 PGAM2P15259 253 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 S100GP29377 79 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 G6PCP35575 357 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 PPP5CP53041 499 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 SYNJ2BPP57105 145 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 SSBP1Q04837 148 aaKnown RBP5.27□□□□□ -1.57
HMGN1-205ENST00000419378 KLF5Q13887 457 aaPredicted RBP5.27□□□□□ -1.57
HMGN1-205ENST00000419378 KLK9Q2XQG4 91 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 C10orf25Q5T742 122 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 STEAP1BQ6NZ63 245 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 CADM3Q8N126 398 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 TMEM229BQ8NBD8 167 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 OR6Q1Q8NGQ2 317 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 DIRAS2Q96HU8 199 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 OR4C12Q96R67 309 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 SRSF8Q9BRL6 282 aaKnown RBP5.27□□□□□ -1.57
HMGN1-205ENST00000419378 FAM212BQ9NTI7 297 aaPredicted RBP5.27□□□□□ -1.57
HMGN1-205ENST00000419378 KLK9Q9UKQ9 250 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 CEPT1Q9Y6K0 416 aa5.27□□□□□ -1.57
HMGN1-205ENST00000419378 TEX50A0A1B0GTY4 177 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 C15orf61A6NNL5 157 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 PRSS47A8MTI9 375 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 PPP5D1E7EU14 171 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 BMPR1BO00238 502 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 NDUFB8O95169 186 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 IGKV1-39P01597 117 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 IGHV3-23P01764 117 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 IGKV1D-39P04432 117 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 SPNP16150 400 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 HIST1H1BP16401 226 aaKnown RBP5.26□□□□□ -1.57
HMGN1-205ENST00000419378 PTBP1P26599 531 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGN1-205ENST00000419378 PIGPP57054 158 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 RND3P61587 244 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 WT1-ASQ06250 92 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 MEF2DQ14814 521 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 RPEL1Q2QD12 228 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 SCGB2B2Q4G0G5 96 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 MORN5Q5VZ52 161 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 THOC7Q6I9Y2 204 aaKnown RBP5.26□□□□□ -1.57
HMGN1-205ENST00000419378 FAAP20Q6NZ36 180 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 MZT2BQ6NZ67 158 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 HSD17B13Q7Z5P4 300 aaPredicted RBP5.26□□□□□ -1.57
HMGN1-205ENST00000419378 HAPLN4Q86UW8 402 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 OR10W1Q8NGF6 305 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 OR9G4Q8NGQ1 327 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 OR13C8Q8NGS7 320 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 MCFD2Q8NI22 146 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 MRGPRFQ96AM1 343 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 ZNF486Q96H40 463 aaPredicted RBP5.26□□□□□ -1.57
HMGN1-205ENST00000419378 SEC22AQ96IW7 307 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 B9D2Q9BPU9 175 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 NXF2Q9GZY0 626 aaKnown RBP5.26□□□□□ -1.57
HMGN1-205ENST00000419378 RBM38Q9H0Z9 239 aaKnown RBP5.26□□□□□ -1.57
HMGN1-205ENST00000419378 MAP6D1Q9H9H5 199 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 RABL2AQ9UBK7 228 aaPredicted RBP5.26□□□□□ -1.57
HMGN1-205ENST00000419378 RABL2BQ9UNT1 228 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 NSG2Q9Y328 171 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 LSM4Q9Y4Z0 139 aaKnown RBP5.26□□□□□ -1.57
HMGN1-205ENST00000419378 S4R3C0 116 aa5.26□□□□□ -1.57
HMGN1-205ENST00000419378 MFSD2BA6NFX1 497 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 CCDC160A6NGH7 325 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 H0Y980 276 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 GSTZ1O43708 216 aaPredicted RBP5.25□□□□□ -1.57
HMGN1-205ENST00000419378 SNAPC5O75971 98 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 IGLV1-51P01701 117 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 HLA-AP01891 365 aaKnown RBP5.25□□□□□ -1.57
HMGN1-205ENST00000419378 SERPINE2P07093 398 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 TRAPPC2P0DI81 140 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 TRAPPC2BP0DI82 140 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 OR13C7P0DN81 318 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 DEFA4P12838 97 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 GP9P14770 177 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 TATDN3Q17R31 274 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 IL34Q6ZMJ4 242 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 GDPD1Q8N9F7 314 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 CCDC71LQ8N9Z2 235 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 OR4C16Q8NGL9 310 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 OR1L8Q8NGR8 309 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 OR5B3Q8NH48 314 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 TERB2Q8NHR7 220 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 MARCH1Q8TCQ1 289 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 LSM10Q969L4 123 aaKnown RBP5.25□□□□□ -1.57
HMGN1-205ENST00000419378 EEF1AKMT3Q96AZ1 226 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 RNF183Q96D59 192 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 TP53RKQ96S44 253 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 TSC22D3Q99576 134 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 HINT2Q9BX68 163 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 NDUFA4L2Q9NRX3 87 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 TMEM14BQ9NUH8 114 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms