RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 PRNDQ9UKY0 176 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 TRAV5A0A0B4J249 113 aa12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 FAM216BQ8N7L0 139 aa12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 GNB1LQ9BYB4 327 aa12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 TUBG2Q9NRH3 451 aa12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 SRRM4A7MD48 611 aaKnown RBP12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 ZNF503Q96F45 646 aa12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 SMG1Q96Q15 3661 aaKnown RBP12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 MGAQ8IWI9 3026 aa12.4□□□□□ -0.42
SEMA3B-203ENST00000419007 GPX1P07203 203 aa12.4□□□□□ -0.43
SEMA3B-203ENST00000419007 TAS2R45P59539 299 aa12.4□□□□□ -0.43
SEMA3B-203ENST00000419007 CX3CL1P78423 397 aa12.4□□□□□ -0.43
SEMA3B-203ENST00000419007 C20orf144Q9BQM9 153 aa12.4□□□□□ -0.43
SEMA3B-203ENST00000419007 NRN1Q9NPD7 142 aa12.4□□□□□ -0.43
SEMA3B-203ENST00000419007 TFPI2P48307 235 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 UBE2L3P68036 154 aaKnown RBP12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 Q0VG73 95 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 RTL8BQ17RB0 113 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 TMEM208Q9BTX3 173 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 SLC25A15Q9Y619 301 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 LY96Q9Y6Y9 160 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 M0QZK8 103 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 REG1BP48304 166 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 CR1LQ2VPA4 569 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 PRR27Q6MZM9 219 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 WDR73Q6P4I2 378 aa12.39□□□□□ -0.43
SEMA3B-203ENST00000419007 PRCDQ00LT1 54 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 PRR31Q5SQ13 230 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 MORN5Q5VZ52 161 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 SVIPQ8NHG7 77 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 SFXN3Q9BWM7 321 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 SLC25A10Q9UBX3 287 aaPredicted RBP12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 TRAV17A0A0B4J275 112 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 TEX50A0A1B0GTY4 177 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 ATOH7Q8N100 152 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 WNT10AQ9GZT5 417 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 TRBV9A0A0B4J1U6 114 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 TRAV34A0A0B4J273 112 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 UPK2O00526 184 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 ESDP10768 282 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 RAB9BQ9NP90 201 aa12.38□□□□□ -0.43
SEMA3B-203ENST00000419007 MT-ND6P03923 174 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 SAA1P0DJI8 122 aaPredicted RBP12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 CT45A6P0DMU7 189 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 CT45A5P0DMU8 189 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 CT45A7P0DMV0 189 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 CGB3P0DN86 165 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 CGB7P0DN87 165 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 TNFAIP6P98066 277 aaPredicted RBP12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 FAM168AQ92567 244 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 COMMD5Q9GZQ3 224 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 ZNF331Q9NQX6 463 aaPredicted RBP12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 OSTCQ9NRP0 149 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 RNF7Q9UBF6 113 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 DKK4Q9UBT3 224 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 GOLT1BQ9Y3E0 138 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 A0A1W2PS18 150 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 NPSP0C0P6 89 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 C8orf88P0DMB2 117 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 PYYP10082 97 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 USF1P22415 310 aaPredicted RBP12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 CHRNB4P30926 498 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 COMPP49747 757 aaPredicted RBP12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 SPATA45Q537H7 98 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 ZNF355PQ9NSJ1 428 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 PPIAL4AQ9Y536 164 aa12.37□□□□□ -0.43
SEMA3B-203ENST00000419007 PLAUP00749 431 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 SGK494Q96LW2 274 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 PIEZO1Q92508 2521 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 ACACAQ13085 2346 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 BMPR1BO00238 502 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 APCSP02743 223 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 CFHR2P36980 270 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 RPRMLQ8N4K4 120 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 HARBI1Q96MB7 349 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 TMEM68Q96MH6 324 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 RNF2Q99496 336 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 TXN2Q99757 166 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 SLC25A33Q9BSK2 321 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 CDC42EP3Q9UKI2 254 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 DSCAML1Q8TD84 2053 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 AKAP13Q12802 2813 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 AMY1AP04745 511 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 WT1P19544 449 aaPredicted RBP12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 DEFB109BQ30KR1 87 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 SLC35E1Q96K37 410 aa12.36□□□□□ -0.43
SEMA3B-203ENST00000419007 DMXL2Q8TDJ6 3036 aa12.35□□□□□ -0.43
SEMA3B-203ENST00000419007 ISLRO14498 428 aa12.35□□□□□ -0.43
SEMA3B-203ENST00000419007 DLEU1O43261 78 aa12.35□□□□□ -0.43
SEMA3B-203ENST00000419007 LHBP01229 141 aa12.35□□□□□ -0.43
SEMA3B-203ENST00000419007 OR5G3P0C626 314 aa12.35□□□□□ -0.43
SEMA3B-203ENST00000419007 SELENOVP59797 346 aa12.35□□□□□ -0.43
SEMA3B-203ENST00000419007 LPAR2Q9HBW0 351 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms