RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 OR10D3Q8NH80 312 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 MAP1LC3CQ9BXW4 147 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 LIPFP07098 398 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 IGFBP2P18065 325 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 WDR86Q86TI4 376 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 UBALD2Q8IYN6 164 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 CT55Q8WUE5 264 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 NABP2Q9BQ15 211 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 IDI2-AS1Q9NZ38 188 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 TRGV8A0A0C4DH27 118 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 HIGD1CA8MV81 97 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 PSPNO60542 156 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 HAND1O96004 215 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 SP1P08047 785 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 CEACAM3P40198 252 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 FOXE3Q13461 319 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 PCOLCEQ15113 449 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 DEFB119Q8N690 84 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 ABI3Q9P2A4 366 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 POLDIP2Q9Y2S7 368 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 VWC2LB2RUY7 222 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 GNG7O60262 68 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 GOSR1O95249 250 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 MYF5P13349 255 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 FOXF2Q12947 444 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 OR1C1Q15619 314 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 C9orf135Q5VTT2 229 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 SSX8Q7RTT4 187 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 TMEM251Q8N6I4 163 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 OR2K2Q8NGT1 345 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 Q8TCH9 128 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 GUCD1Q96NT3 240 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 SH3BGRL2Q9UJC5 107 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 A6NDN8 102 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 HIST1H1EP10412 219 aaKnown RBP6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 PSG3Q16557 428 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 FAM216AQ8WUB2 273 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 RTL8AQ9BWD3 113 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 TCF19Q9Y242 345 aa6.58□□□□□ -1.36
HMGXB4-202ENST00000418170 H3BUT2 72 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 FCGR3BO75015 233 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 APOA2P02652 100 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 CD27P26842 260 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 SSR4P51571 173 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 LINC01545Q5VT33 79 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 RPS19BP1Q86WX3 136 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 OR5A1Q8NGJ0 315 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 LINC00470Q9BZP3 86 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 NPFFR1Q9GZQ6 430 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 PSG11Q9UQ72 335 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 FNDC10F2Z333 226 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 FOXA3P55318 350 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 TAS2R45P59539 299 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 LYSMD4Q5XG99 296 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 OR10AG1Q8NH19 301 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 LINC00479Q96M42 142 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 JKAMPQ9P055 326 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 A0A0G2JLM5 398 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 MRPL33O75394 65 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 CEBPDP49716 269 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 HBBP68871 147 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 TRAT1Q6PIZ9 186 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 VKORC1L1Q8N0U8 176 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 LRRC29Q8WV35 223 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 MCRIP2Q9BUT9 160 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 SELENOKQ9Y6D0 94 aa6.57□□□□□ -1.36
HMGXB4-202ENST00000418170 TRAV3A0A0B4J244 114 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 A0A1B0GV72 72 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 UQCRFS1P47985 274 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 PLP1P60201 277 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 AESQ08117 197 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 C19orf24Q9BVV8 132 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 HSPB8Q9UJY1 196 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 PPIAL4EA0A075B759 164 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 LOC102723996A0A087X1L8 192 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 PPIAL4CA0A0B4J2A2 164 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 PROP1O75360 226 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 PPIAL4FP0DN26 164 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 AZU1P20160 251 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 ERVK-16P61578 105 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 Q6ZR03 302 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 SPEM1Q8N4L4 309 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 TSTD1Q8NFU3 115 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 VSTM2AQ8TAG5 236 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 PLPPR2Q96GM1 343 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 CYC1P08574 325 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 FGF6P10767 208 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 FOXG1P55316 489 aaPredicted RBP6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 PLGLB1Q02325 96 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 S100A7AQ86SG5 101 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 OR4A5Q8NH83 315 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 COQ2Q96H96 371 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 C7orf69Q9H7B7 122 aa6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 AMMECR1Q9Y4X0 333 aaPredicted RBP6.56□□□□□ -1.36
HMGXB4-202ENST00000418170 IGHV3-43A0A0B4J1X8 118 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 IGHV1OR15-9A0A0B4J2B8 117 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 A0A0G2JMM0 328 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 A0A1W2PPB8 328 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 KIR3DP1A8MWS1 328 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 IGHV3-43DP0DP04 118 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms