RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 GNRHRP30968 328 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 G6PCP35575 357 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 NPBWR1P48145 328 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 HERV-K104P61576 105 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 C12orf74Q32Q52 190 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 UBE2UQ5VVX9 321 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 C22orf42Q6IC83 251 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 ZNF367Q7RTV3 350 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 FAM24BQ8N5W8 94 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 OR5AP2Q8NGF4 316 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 FCAMRQ8WWV6 532 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 MOB3AQ96BX8 217 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 GRAMD2BQ96HH9 432 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 NDUFB11Q9NX14 153 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 RHBDL2Q9NX52 303 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 DAPK2Q9UIK4 370 aa5.67□□□□□ -1.5
HLA-DPA1-241ENST00000417724 IGHV3-66A0A0C4DH42 116 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 SMIM30A4D0T7 59 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 K7EQG2 157 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 PGLYRP1O75594 196 aaPredicted RBP5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 IGHV3-48P01763 117 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 APOHP02749 345 aaPredicted RBP5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 RLN1P04808 185 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 CBX5P45973 191 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 ERHP84090 104 aaKnown RBP5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 TBCEQ15813 527 aaPredicted RBP5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 ZNF600Q6ZNG1 722 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 UBE2DNLQ8IWF7 75 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 CMTM1Q8IZ96 169 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 CSNK1G2-AS1Q8NCQ2 148 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 STXBP6Q8NFX7 210 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 PINX1Q96BK5 328 aaKnown RBP5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 C1QTNF4Q9BXJ3 329 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 CLEC5AQ9NY25 188 aa5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 PUS1Q9Y606 427 aaKnown RBP eCLIP5.66□□□□□ -1.5
HLA-DPA1-241ENST00000417724 DNAH6Q9C0G6 4158 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 A0A0A6YYH2 397 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 A6NJ64 397 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 DBX1A6NMT0 343 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 KNCNA6PVL3 124 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 FCER2P06734 321 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 ZNF688P0C7X2 276 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 C4BPBP20851 252 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 FGF9P31371 208 aaPredicted RBP5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 SCAND1P57086 179 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 NUTF2P61970 127 aaKnown RBP5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 ACTL10Q5JWF8 245 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 DHRS11Q6UWP2 260 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 Q6ZR54 194 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 ZNF767PQ75MW2 155 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 ZNF575Q86XF7 245 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 ZNF114Q8NC26 417 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 OR4A16Q8NH70 328 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 LGALS14Q8TCE9 139 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 NARS2Q96I59 477 aaKnown RBP5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 FAM210BQ96KR6 192 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 ZFAND3Q9H8U3 227 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 DIABLOQ9NR28 239 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 CELA1Q9UNI1 258 aa5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 RRP15Q9Y3B9 282 aaKnown RBP5.65□□□□□ -1.5
HLA-DPA1-241ENST00000417724 IGLV2-18A0A075B6J9 118 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 A0A1B0GU03 582 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 CDK2AP2O75956 126 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TMEM50AO95807 157 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 CD74P04233 296 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SPART-AS1P0CW21 52 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 S100GP29377 79 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SNCAP37840 140 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 P2RY1P47900 373 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 RFX2P48378 723 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 EIF2B2P49770 351 aaKnown RBP5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 HSPE1P61604 102 aaKnown RBP5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 PRCDQ00LT1 54 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 RNF212Q495C1 297 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 KCTD21Q4G0X4 260 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 C1orf134Q5TEV5 83 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SFXN4Q6P4A7 337 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 H2BFWTQ7Z2G1 175 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 METTL26Q96S19 204 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 RAB40CQ96S21 281 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SCRT1Q9BWW7 348 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 AUNIPQ9H7T9 357 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 IFT46Q9NQC8 304 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 FAM212BQ9NTI7 297 aaPredicted RBP5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TXNL4BQ9NX01 149 aaKnown RBP5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 EHFQ9NZC4 300 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 BLOC1S6Q9UL45 172 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 PKHD1P08F94 4074 aa5.64□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TMEM189A5PLL7 270 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 HELTA6NFD8 242 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 GPR31O00270 319 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SCGB2A1O75556 95 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 CRYBB3P26998 211 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 AP2S1P53680 142 aaPredicted RBP5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SUB1P53999 127 aaKnown RBP eCLIP5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 AQP4P55087 323 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 DHRS2Q13268 280 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 LPCAT3Q6P1A2 487 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 Q6ZRM9 215 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 OR6F1Q8NGZ6 308 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms