RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 ACY3Q96HD9 319 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 IFI27L2Q9H2X8 130 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 RBM7Q9Y580 266 aaKnown RBP11.72□□□□□ -0.53
SGCE-202ENST00000415788 RAB29O14966 203 aa11.71□□□□□ -0.53
SGCE-202ENST00000415788 TMEM50AO95807 157 aa11.71□□□□□ -0.53
SGCE-202ENST00000415788 PAX9P55771 341 aa11.71□□□□□ -0.53
SGCE-202ENST00000415788 CCDC144NLQ6NUI1 221 aa11.71□□□□□ -0.53
SGCE-202ENST00000415788 FAM71F2Q6NXP2 309 aa11.71□□□□□ -0.53
SGCE-202ENST00000415788 LYG1Q8N1E2 194 aa11.71□□□□□ -0.53
SGCE-202ENST00000415788 OR4X1Q8NH49 305 aa11.71□□□□□ -0.53
SGCE-202ENST00000415788 RPEQ96AT9 228 aa11.71□□□□□ -0.53
SGCE-202ENST00000415788 PARD6GQ9BYG4 376 aaPredicted RBP11.71□□□□□ -0.53
SGCE-202ENST00000415788 NAT8Q9UHE5 227 aa11.71□□□□□ -0.53
SGCE-202ENST00000415788 A0A0U1RQK1 487 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 LY6LH3BQJ8 138 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 GZMBP10144 247 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 TPTE2P1Q5T6R2 138 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 ZNF818PQ6ZRF7 136 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 LHFPL4Q7Z7J7 247 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.7□□□□□ -0.54
SGCE-202ENST00000415788 PINX1Q96BK5 328 aaKnown RBP11.7□□□□□ -0.54
SGCE-202ENST00000415788 ZNRD1Q9P1U0 126 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 GAB2Q9UQC2 676 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 TLN2Q9Y4G6 2542 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 AMBPP02760 352 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 ST6GALNAC6Q969X2 333 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 S1PR3Q99500 378 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 MEGF9Q9H1U4 602 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 RPRMQ9NS64 109 aa11.7□□□□□ -0.54
SGCE-202ENST00000415788 SAA2-SAA4A0A096LPE2 208 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 ZFP92A6NM28 416 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 PFN1P07737 140 aaKnown RBP11.69□□□□□ -0.54
SGCE-202ENST00000415788 SAA2P0DJI9 122 aaPredicted RBP11.69□□□□□ -0.54
SGCE-202ENST00000415788 GPR12P47775 334 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 ZNF816Q0VGE8 651 aaPredicted RBP11.69□□□□□ -0.54
SGCE-202ENST00000415788 HNF4GQ14541 408 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 MSMO1Q15800 293 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 LDLRAD2Q5SZI1 272 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 CYP2G1PQ6ZSU1 146 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 CENPVQ7Z7K6 275 aaPredicted RBP11.69□□□□□ -0.54
SGCE-202ENST00000415788 BCL6BQ8N143 479 aaPredicted RBP11.69□□□□□ -0.54
SGCE-202ENST00000415788 C22orf15Q8WYQ4 148 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 MISP3Q96FF7 219 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 AJUBAQ96IF1 538 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 OR2D2Q9H210 308 aa11.69□□□□□ -0.54
SGCE-202ENST00000415788 ZNF833PQ6ZTB9 187 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 NEU1Q99519 415 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 HILPDAQ9Y5L2 63 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 CELSR1Q9NYQ6 3014 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 ZANQ9Y493 2812 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 FAM3BP58499 235 aaPredicted RBP11.68□□□□□ -0.54
SGCE-202ENST00000415788 TMEM241Q24JQ0 296 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 DEFB112Q30KQ8 113 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 TMEM41BQ5BJD5 291 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 TGIF2LXQ8IUE1 241 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 ZNF664Q8N3J9 261 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 ZNF645Q8N7E2 425 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 OR5B12Q96R08 314 aa11.68□□□□□ -0.54
SGCE-202ENST00000415788 IGKV1D-13A0A0B4J2D9 117 aa11.67□□□□□ -0.54
SGCE-202ENST00000415788 TCAPO15273 167 aa11.67□□□□□ -0.54
SGCE-202ENST00000415788 IGKV1-13P0DP09 117 aa11.67□□□□□ -0.54
SGCE-202ENST00000415788 NUTF2P61970 127 aaKnown RBP11.67□□□□□ -0.54
SGCE-202ENST00000415788 HBG1P69891 147 aa11.67□□□□□ -0.54
SGCE-202ENST00000415788 HBG2P69892 147 aa11.67□□□□□ -0.54
SGCE-202ENST00000415788 USF2Q15853 346 aaPredicted RBP11.67□□□□□ -0.54
SGCE-202ENST00000415788 ACOT6Q3I5F7 207 aaPredicted RBP11.67□□□□□ -0.54
SGCE-202ENST00000415788 ZBTB34Q8NCN2 500 aa11.67□□□□□ -0.54
SGCE-202ENST00000415788 TMEM170AQ8WVE7 144 aa11.67□□□□□ -0.54
SGCE-202ENST00000415788 LSM10Q969L4 123 aaKnown RBP11.67□□□□□ -0.54
SGCE-202ENST00000415788 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
SGCE-202ENST00000415788 NAV3Q8IVL0 2385 aa11.67□□□□□ -0.54
SGCE-202ENST00000415788 CEBPZOSA8MTT3 80 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 PPP5D1E7EU14 171 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 TMEM250H0YL14 139 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 PGLYRP1O75594 196 aaPredicted RBP11.66□□□□□ -0.54
SGCE-202ENST00000415788 KBTBD11O94819 623 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 METTL15P1P0C7V9 234 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 F2RP25116 425 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 BRS3P32247 399 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 LRRC75BQ2VPJ9 315 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 LCN15Q6UWW0 184 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 ZNF418Q8TF45 676 aaPredicted RBP11.66□□□□□ -0.54
SGCE-202ENST00000415788 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 GPR146Q96CH1 333 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 ANAPC16Q96DE5 110 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 CCL28Q9NRJ3 127 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 TIMM9Q9Y5J7 89 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 SONP18583 2426 aaKnown RBP11.66□□□□□ -0.54
SGCE-202ENST00000415788 IGHV1-3A0A0C4DH29 117 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 A0A1W2PPI3 338 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 XKRY2A2RUG3 117 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 DIAPH2-AS1Q14236 149 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 ZNF726P1Q15940 193 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 BSXQ3C1V8 233 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 Q6YL49 198 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 C16orf82Q7Z2V1 217 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 DYNAPQ8N1N2 210 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 OR51G1Q8NGK1 321 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 BTF3L4Q96K17 158 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms