RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 M0R296 226 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 CA1P00915 261 aaPredicted RBP7.99□□□□□ -1.13
CD44-206ENST00000415148 REG1AP05451 166 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 GPX1P07203 203 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 CRYBB3P26998 211 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 PPOXP50336 477 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 TMEM183BQ1AE95 376 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 ATOH7Q8N100 152 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 FAM19A2Q8N3H0 131 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 STPG4Q8N801 248 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 ZNF503Q96F45 646 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 TBL2Q9Y4P3 447 aaKnown RBP7.99□□□□□ -1.13
CD44-206ENST00000415148 SMIM27A0A1W2PRY6 76 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 SPRY3O43610 288 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 NDUFB8O95169 186 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 C8orf88P0DMB2 117 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 CT45A6P0DMU7 189 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 CT45A5P0DMU8 189 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 CT45A7P0DMV0 189 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 PMCHP20382 165 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 CTRLP40313 264 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 ZNF83P51522 516 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 SELENOVP59797 346 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 MLANAQ16655 118 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 NHLRC2Q8NBF2 726 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 SLC25A33Q9BSK2 321 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 SLC35D1Q9NTN3 355 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 DCAF16Q9NXF7 216 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 RPUSD1Q9UJJ7 312 aaKnown RBP7.98□□□□□ -1.13
CD44-206ENST00000415148 TTC28Q96AY4 2481 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 A0A1W2PS18 150 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 CD69Q07108 199 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 MRPL54Q6P161 138 aaKnown RBP7.98□□□□□ -1.13
CD44-206ENST00000415148 RASL11AQ6T310 242 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 ZNF788Q6ZQV5 615 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 TMEM136Q6ZRR5 245 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 SEM1Q6ZVN7 128 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 SIGLECL1Q8N7X8 197 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 OSR1Q8TAX0 266 aaPredicted RBP7.98□□□□□ -1.13
CD44-206ENST00000415148 FAM168AQ92567 244 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 GAFA1Q96PS6 74 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 HINT2Q9BX68 163 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 WNT10AQ9GZT5 417 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 GCM1Q9NP62 436 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 NRN1Q9NPD7 142 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 TP73-AS1Q9UF72 201 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 NAT8BQ9UHF3 227 aa7.98□□□□□ -1.13
CD44-206ENST00000415148 IGKV1OR2-108A0A075B7D4 117 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 TRAV34A0A0B4J273 112 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 DIRC3C9JPN6 131 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 IGLV2-8P01709 118 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 HLA-DQA1P01909 254 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 AMY1AP04745 511 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 RNASE2P10153 161 aaKnown RBP7.97□□□□□ -1.13
CD44-206ENST00000415148 SFTPCP11686 197 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 TNFSF4P23510 183 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 LCN12Q6JVE5 192 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 COMMD5Q9GZQ3 224 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 TECTAO75443 2155 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 DSCAMO60469 2012 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 SVILO95425 2214 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 hADV38S2A0JD32 116 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 OR7C2O60412 319 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 MMP23AO75900 390 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 SUMO1P63165 101 aaKnown RBP7.97□□□□□ -1.13
CD44-206ENST00000415148 ERHP84090 104 aaKnown RBP7.97□□□□□ -1.13
CD44-206ENST00000415148 TNFAIP6P98066 277 aaPredicted RBP7.97□□□□□ -1.13
CD44-206ENST00000415148 SPATA45Q537H7 98 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 IBA57Q5T440 356 aaKnown RBP7.97□□□□□ -1.13
CD44-206ENST00000415148 TEX36Q5VZQ5 186 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 DUX4L9Q6RFH8 374 aaPredicted RBP7.97□□□□□ -1.13
CD44-206ENST00000415148 ZNF833PQ6ZTB9 187 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 NIT1Q86X76 327 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 OR4A5Q8NH83 315 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 IGF2BP2-AS1Q96M15 143 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 LINC00479Q96M42 142 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 ZNF714Q96N38 554 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 ZNRD1Q9P1U0 126 aa7.97□□□□□ -1.13
CD44-206ENST00000415148 IZUMO1RA6ND01 250 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 SRRM4A7MD48 611 aaKnown RBP7.96□□□□□ -1.13
CD44-206ENST00000415148 GGTLC3B5MD39 225 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 BMPR1BO00238 502 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 DLL1O00548 723 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 TCF21O43680 179 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 CEACAM4O75871 244 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 AMTP48728 403 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 RELQ04864 619 aaPredicted RBP7.96□□□□□ -1.13
CD44-206ENST00000415148 GAGE1Q13065 139 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 FAM201AQ5SY85 155 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 MORN5Q5VZ52 161 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 ZNF474Q6S9Z5 364 aaPredicted RBP7.96□□□□□ -1.13
CD44-206ENST00000415148 C11orf42Q8N5U0 333 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 OR4B1Q8NGF8 309 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 WIPF2Q8TF74 440 aaPredicted RBP7.96□□□□□ -1.13
CD44-206ENST00000415148 DNAJC4Q9NNZ3 241 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 NDUFA4L2Q9NRX3 87 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 ZNF586Q9NXT0 402 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 CDC42EP3Q9UKI2 254 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 LINC00312Q9Y6C7 94 aa7.96□□□□□ -1.13
CD44-206ENST00000415148 PSMB11A5LHX3 300 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms