RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 RPL18AQ02543 176 aaKnown RBP1.82□□□□□ -2.12
MCF2-204ENST00000414978 ORMDL2Q53FV1 153 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ACSM3Q53FZ2 586 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 C9orf129Q5T035 196 aaKnown RBP1.82□□□□□ -2.12
MCF2-204ENST00000414978 C5orf46Q6UWT4 87 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 FAM71E2Q8N5Q1 922 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ACBD7Q8N6N7 88 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 C14orf178Q8N769 122 aaPredicted RBP1.82□□□□□ -2.12
MCF2-204ENST00000414978 ZNF485Q8NCK3 441 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 OR4K13Q8NH42 304 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ZNRF2Q8NHG8 242 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 GPR119Q8TDV5 335 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 MRPL48Q96GC5 212 aaKnown RBP1.82□□□□□ -2.12
MCF2-204ENST00000414978 RBP7Q96R05 134 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 METTL9Q9H1A3 318 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 MAP1LC3AQ9H492 121 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 CENPVL3A0A0U1RRI6 287 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 OR6C6A6NF89 314 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 C17orf51A8MQB3 221 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 C3orf84H3BNL1 204 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 FABP7O15540 132 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 OR2T1O43869 369 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 HPGDSO60760 199 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 ARL6IP5O75915 188 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 CYB5R3P00387 301 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 CD14P08571 375 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 CXCL3P19876 107 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 PSMA1P25786 263 aaKnown RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 PFN2P35080 140 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 APLNRP35414 380 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 PPP1CCP36873 323 aaKnown RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 FAM3AP98173 230 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 IFITM3Q01628 133 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 TOMM34Q15785 309 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 PRR4Q16378 134 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 Q1RN00 199 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 LRRC75BQ2VPJ9 315 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 UBE2NLQ5JXB2 153 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 TSPO2Q5TGU0 170 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 C1orf140Q5VVS0 124 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 CLEC19AQ6UXS0 136 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 UNQ9165/PRO28630Q6UXU0 137 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 NAA40Q86UY6 237 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 OR4M2Q8NGB6 313 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 OR4K17Q8NGC6 315 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 OR52N1Q8NH53 320 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 DDIT4LQ96D03 193 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 GALNT14Q96FL9 552 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 SLC22A4Q9H015 551 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 OR51E2Q9H255 320 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 DCSTAMPQ9H295 470 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 TPK1Q9H3S4 243 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 SLC2A9Q9NRM0 540 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 SLC7A10Q9NS82 523 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 MED11Q9P086 117 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 RBM12B-AS1Q9P1G2 102 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 ZNF230Q9UIE0 474 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 ZNF580Q9UK33 172 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 SSR3Q9UNL2 185 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 PKIGQ9Y2B9 76 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 LSM2Q9Y333 95 aaKnown RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 MPDZO75970 2070 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 HRNRQ86YZ3 2850 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 IGKV1-27A0A075B6S5 117 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 A0A087WX48 190 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 PNMA8CA0A1B0GUJ8 204 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 TMEM72A0PK05 275 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 TAAR5O14804 337 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 COX7A2P2O60397 106 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 GAS8-AS1O95177 125 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 IGHV3-23P01764 117 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 BGLAPP02818 100 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 GYPBP06028 91 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 ADRA2AP08913 450 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 MRPL3P09001 348 aaKnown RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 FBP1P09467 338 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 ASAH2BP0C7U1 165 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 CMC4P56277 68 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 RAB14P61106 215 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 RPL18Q07020 188 aaKnown RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 KRR1Q13601 381 aaKnown RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 ZNF791Q3KP31 576 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 ZNF684Q5T5D7 378 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 RPS19BP1Q86WX3 136 aaKnown RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 C12orf45Q8N5I9 185 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 SUMF2Q8NBJ7 301 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 OR5J2Q8NH18 312 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 APOBEC3DQ96AK3 386 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 DUX3Q96PT4 197 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 GPX7Q96SL4 187 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 NMNAT3Q96T66 252 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 TBX5Q99593 518 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 OR11A1Q9GZK7 315 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 RERGLQ9H628 205 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 NDUFB11Q9NX14 153 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 CSMD1Q96PZ7 3565 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 TANC2Q9HCD6 1990 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 PHOX2AO14813 284 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 FSTL3O95633 263 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 GIG44P09565 113 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms