RNA–Protein interactions for RNA: ENST00000413539.6

DYSF-210, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-210ENST00000413539 B9A039 149 aa12.6□□□□□ -0.39
DYSF-210ENST00000413539 CCL3L1P16619 93 aa12.6□□□□□ -0.39
DYSF-210ENST00000413539 ZNF837Q96EG3 531 aaPredicted RBP12.6□□□□□ -0.39
DYSF-210ENST00000413539 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
DYSF-210ENST00000413539 HBDP02042 147 aa12.6□□□□□ -0.39
DYSF-210ENST00000413539 LDLRAD2Q5SZI1 272 aa12.6□□□□□ -0.39
DYSF-210ENST00000413539 ZNF525Q8N782 197 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 GLI3P10071 1580 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 CD28P10747 220 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 COLCA1Q6ZS62 124 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 COLQQ9Y215 455 aaPredicted RBP12.59□□□□□ -0.39
DYSF-210ENST00000413539 RNF222A6NCQ9 220 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 IFI27P40305 119 aaPredicted RBP12.59□□□□□ -0.39
DYSF-210ENST00000413539 TDGF1P3P51864 188 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 A0A087WV48 116 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 EFEMP2O95967 443 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 CDKN1AP38936 164 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 ZNF415Q09FC8 603 aa12.59□□□□□ -0.39
DYSF-210ENST00000413539 SAA2-SAA4A0A096LPE2 208 aa12.58□□□□□ -0.39
DYSF-210ENST00000413539 SAA2P0DJI9 122 aaPredicted RBP12.58□□□□□ -0.39
DYSF-210ENST00000413539 COX5BP10606 129 aa12.58□□□□□ -0.39
DYSF-210ENST00000413539 HIST1H4AP62805 103 aaKnown RBP12.58□□□□□ -0.39
DYSF-210ENST00000413539 RNF182Q8N6D2 247 aa12.58□□□□□ -0.39
DYSF-210ENST00000413539 DPM3Q9P2X0 92 aa12.58□□□□□ -0.39
DYSF-210ENST00000413539 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.39
DYSF-210ENST00000413539 A0A0G2JK05 382 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 SMIM10L1P0DMW3 83 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 PRTN3P24158 256 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 SMIM10Q96HG1 83 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 PRDM13Q9H4Q3 707 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 DPM2O94777 84 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 Q6ZT83 130 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 CFHR5Q9BXR6 569 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 SRSF6Q13247 344 aaKnown RBP12.58□□□□□ -0.4
DYSF-210ENST00000413539 FAM181AQ8N9Y4 354 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 C18orf12Q96KH6 178 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 KBTBD11-OT1A0A1B0GTJ5 212 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 UMODP07911 640 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 CD300EQ496F6 205 aaPredicted RBP12.58□□□□□ -0.4
DYSF-210ENST00000413539 ZCCHC24Q8N2G6 241 aaKnown RBP12.58□□□□□ -0.4
DYSF-210ENST00000413539 GATD1Q8NB37 220 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 PLPPR1Q8TBJ4 325 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 SPOCK3Q9BQ16 436 aa12.58□□□□□ -0.4
DYSF-210ENST00000413539 TM2D1Q9BX74 207 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 IGKCP01834 107 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 RIPPLY2Q5TAB7 128 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 SIGMAR1Q99720 223 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 SLC25A2Q9BXI2 301 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 ZNF703Q9H7S9 590 aaPredicted RBP12.57□□□□□ -0.4
DYSF-210ENST00000413539 EPOPA6NHQ4 379 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 IGHV1-2P23083 117 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 OSR1Q8TAX0 266 aaPredicted RBP12.57□□□□□ -0.4
DYSF-210ENST00000413539 OTORQ9NRC9 128 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 GTSCR1Q86UQ5 136 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 TMEM170AQ8WVE7 144 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 C7orf69Q9H7B7 122 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 VSIRQ9H7M9 311 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 SEPSECSQ9HD40 501 aaKnown RBP12.57□□□□□ -0.4
DYSF-210ENST00000413539 CRIM1Q9NZV1 1036 aa12.57□□□□□ -0.4
DYSF-210ENST00000413539 A8MXK9 166 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 LINC00158P58513 81 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 NSUN5P1Q3KNT7 163 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 CIARTQ8N365 385 aaPredicted RBP12.56□□□□□ -0.4
DYSF-210ENST00000413539 LINC00527Q9UJ94 153 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 IGKV1D-13A0A0B4J2D9 117 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 IGKV1-13P0DP09 117 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 PAX1P15863 534 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 A0A087WWC5 75 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 SRSF1Q07955 248 aaKnown RBP eCLIP12.56□□□□□ -0.4
DYSF-210ENST00000413539 EIF4EBP2Q13542 120 aaPredicted RBP12.56□□□□□ -0.4
DYSF-210ENST00000413539 TRAV5A0A0B4J249 113 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 SP9P0CG40 484 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 LTBRP36941 435 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 C1orf53Q5VUE5 145 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 IGHV2OR16-5A0A0B4J2B6 119 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 LYNX1G3V0Z9 82 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 LYNX1P0DP58 116 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 FAM168AQ92567 244 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 RNF126Q9BV68 326 aa12.56□□□□□ -0.4
DYSF-210ENST00000413539 HOXB1P14653 301 aaPredicted RBP12.55□□□□□ -0.4
DYSF-210ENST00000413539 TIMM23BQ5SRD1 257 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 CTHRC1Q96CG8 243 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 ZNF48Q96MX3 618 aaPredicted RBP12.55□□□□□ -0.4
DYSF-210ENST00000413539 SAMD5Q5TGI4 173 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 TMEM167AQ8TBQ9 72 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 LURAP1LQ8IV03 231 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 CHD5Q8TDI0 1954 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 TRGV4A0A0C4DH28 118 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 PSG7Q13046 419 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 WFDC1Q9HC57 220 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 CHCHD2Q9Y6H1 151 aaPredicted RBP12.55□□□□□ -0.4
DYSF-210ENST00000413539 FABP5P3A8MUU1 101 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 OR4X2Q8NGF9 303 aa12.55□□□□□ -0.4
DYSF-210ENST00000413539 TP53BP1Q12888 1972 aaPredicted RBP12.55□□□□□ -0.4
DYSF-210ENST00000413539 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
DYSF-210ENST00000413539 A0A0G2JLM5 398 aa12.54□□□□□ -0.4
DYSF-210ENST00000413539 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
DYSF-210ENST00000413539 VDAC2P45880 294 aaPredicted RBP12.54□□□□□ -0.4
DYSF-210ENST00000413539 OCC1Q8TAD7 63 aa12.54□□□□□ -0.4
DYSF-210ENST00000413539 ORAOV1Q8WV07 137 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms