RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 MANBALQ9NQG1 85 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 ZFP30Q9Y2G7 519 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 WDR25Q64LD2 544 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-211ENST00000413186 OR2T10Q8NGZ9 312 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 B4DEV8 164 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 B4DSR2 109 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 RPL27AP46776 148 aaKnown RBP7.1□□□□□ -1.27
SYNE1-211ENST00000413186 GUSBP1Q15486 140 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 FAM209BQ5JX69 171 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 DMRTA1Q5VZB9 504 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 ZNF788Q6ZQV5 615 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 TMUB1Q9BVT8 246 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 TMEM133Q9H2Q1 129 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 CLEC5AQ9NY25 188 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 SLC45A2Q9UMX9 530 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 MRPS16Q9Y3D3 137 aaKnown RBP7.1□□□□□ -1.27
SYNE1-211ENST00000413186 OPRK1P41145 380 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 DAZAP2Q15038 168 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-211ENST00000413186 DNM1P46Q6ZS02 220 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 BAALCQ8WXS3 180 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 WSB1Q9Y6I7 421 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 FREM1Q5H8C1 2179 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 TRBV6-6A0A0A6YYG2 114 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 GPR183P32249 361 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 CDX1P47902 265 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-211ENST00000413186 HIST1H4AP62805 103 aaKnown RBP7.09□□□□□ -1.27
SYNE1-211ENST00000413186 OR52E5Q8NH55 327 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 OSR1Q8TAX0 266 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-211ENST00000413186 SLC25A33Q9BSK2 321 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 LOC389332A0A1B0GUA5 103 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 SMAD7O15105 426 aaKnown RBP7.09□□□□□ -1.27
SYNE1-211ENST00000413186 RPL32P62910 135 aaKnown RBP7.09□□□□□ -1.27
SYNE1-211ENST00000413186 RPL8P62917 257 aaKnown RBP7.09□□□□□ -1.27
SYNE1-211ENST00000413186 LEAP2Q969E1 77 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 ACY3Q96HD9 319 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 TMEM70Q9BUB7 260 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 JKAMPQ9P055 326 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 CCL3L1P16619 93 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 CAMPP49913 170 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 DYNLT3P51808 116 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 RIPPLY3P57055 190 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 GAGE2BQ13066 116 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 TMEM187Q14656 261 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 ANKRD55Q3KP44 614 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 GAGE2EQ4V326 116 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 ACSM6Q6P461 480 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 HEPN1Q6WQI6 88 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 Q6ZR03 302 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 MYPOPQ86VE0 399 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-211ENST00000413186 RXFP4Q8TDU9 374 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 MISP3Q96FF7 219 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 DCTN5Q9BTE1 182 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 RSRP1Q9BUV0 290 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 GAGE2DQ9UEU5 116 aa7.09□□□□□ -1.27
SYNE1-211ENST00000413186 TNRC6BQ9UPQ9 1833 aaKnown RBP7.09□□□□□ -1.28
SYNE1-211ENST00000413186 PLCE1Q9P212 2302 aa7.09□□□□□ -1.28
SYNE1-211ENST00000413186 C19orf54Q5BKX5 351 aa7.09□□□□□ -1.28
SYNE1-211ENST00000413186 PDPNQ86YL7 162 aa7.09□□□□□ -1.28
SYNE1-211ENST00000413186 ISOC2Q96AB3 205 aa7.09□□□□□ -1.28
SYNE1-211ENST00000413186 OR51B2Q9Y5P1 312 aa7.09□□□□□ -1.28
SYNE1-211ENST00000413186 PIEZO2Q9H5I5 2752 aa7.09□□□□□ -1.28
SYNE1-211ENST00000413186 WNK2Q9Y3S1 2297 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 A0A0A6YYD4 124 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 SHISA9B4DS77 424 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 WISP2O76076 250 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 NAPSAO96009 420 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 ORM1P02763 201 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 EGR1P18146 543 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 COL8A2P25067 703 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 QRFPP83859 136 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 FAM74A3Q4VXF1 159 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 ZNF818PQ6ZRF7 136 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 CD177Q8N6Q3 437 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 OR1L4Q8NGR5 311 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 RPUSD1Q9UJJ7 312 aaKnown RBP7.08□□□□□ -1.28
SYNE1-211ENST00000413186 IGHV3-72A0A0B4J1Y9 119 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 MAP1LC3B2A6NCE7 125 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 RBFOX3A6NFN3 312 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 SLC35B1P78383 322 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 KRTAP27-1Q3LI81 207 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 Q6P435 159 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 ZNF841Q6ZN19 808 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 FGFRL1Q8N441 504 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 OR8A1Q8NGG7 326 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 OR5AN1Q8NGI8 311 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 GPR82Q96P67 336 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 MAP1LC3BQ9GZQ8 125 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 COA4Q9NYJ1 87 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 NAT8Q9UHE5 227 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 TRAV41A0A0B4J266 112 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 PSPNO60542 156 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 ZNF253O75346 499 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 NCR2O95944 276 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 TMEM252Q8N6L7 170 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 HIST1H4GQ99525 98 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 MAP1LC3CQ9BXW4 147 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 GTSF1LQ9H1H1 148 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 NCOR1P1Q9H4R4 102 aa7.08□□□□□ -1.28
SYNE1-211ENST00000413186 SPG11Q96JI7 2443 aa7.07□□□□□ -1.28
SYNE1-211ENST00000413186 F8VVB4 439 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms