RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 IGFBP2P18065 325 aa9.27□□□□□ -0.92
PTPRF-204ENST00000412568 WFDC3Q8IUB2 231 aa9.27□□□□□ -0.92
PTPRF-204ENST00000412568 Q8WTZ3 238 aa9.27□□□□□ -0.92
PTPRF-204ENST00000412568 RNF138Q8WVD3 245 aa9.27□□□□□ -0.92
PTPRF-204ENST00000412568 PAXXQ9BUH6 204 aa9.27□□□□□ -0.92
PTPRF-204ENST00000412568 PARLQ9H300 379 aa9.27□□□□□ -0.92
PTPRF-204ENST00000412568 LINC00312Q9Y6C7 94 aa9.27□□□□□ -0.92
PTPRF-204ENST00000412568 TEX50A0A1B0GTY4 177 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 SAA1P0DJI8 122 aaPredicted RBP9.27□□□□□ -0.93
PTPRF-204ENST00000412568 TCTAP57738 103 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
PTPRF-204ENST00000412568 MBNL2Q5VZF2 373 aaKnown RBP9.27□□□□□ -0.93
PTPRF-204ENST00000412568 PCSK4Q6UW60 755 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 UNQ5815/PRO19632Q6UWF5 114 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 LYPD2Q6UXB3 125 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 Q6ZRM9 215 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 P2RX4Q99571 388 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 TRAV3A0A0B4J244 114 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 CGB1A6NKQ9 187 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 LINC00473A8K010 186 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 IGKV1-5P01602 117 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 ZNF672Q499Z4 452 aaPredicted RBP9.27□□□□□ -0.93
PTPRF-204ENST00000412568 GCSAMLQ5JQS6 135 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 UNQ6494/PRO21346Q6UXR6 183 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 LHFPL4Q7Z7J7 247 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 RBM14Q96PK6 669 aaKnown RBP9.27□□□□□ -0.93
PTPRF-204ENST00000412568 NDFIP1Q9BT67 221 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 SPRY4Q9C004 299 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 HYPMO75409 117 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 IGKV1D-33P01593 117 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 IGKV1-33P01594 117 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 FXYD3Q14802 87 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 KIR3DL3Q8N743 410 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 STPG3Q8N7X2 389 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 OR10W1Q8NGF6 305 aa9.27□□□□□ -0.93
PTPRF-204ENST00000412568 SSBP3Q9BWW4 388 aaPredicted RBP9.27□□□□□ -0.93
PTPRF-204ENST00000412568 HIVEP3Q5T1R4 2406 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 YPEL1O60688 119 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 CD99P14209 185 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 ZNF137PP52743 207 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 NMSQ5H8A3 153 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 YPEL2Q96QA6 119 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 NABP2Q9BQ15 211 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 NPCDR1Q9BY65 106 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 GOSR1O95249 250 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 PF4V1P10720 104 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 NBL1P41271 181 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 RNF2Q99496 336 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 CRYBB3P26998 211 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 PPOXP50336 477 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 VSIRQ9H7M9 311 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 DPM3Q9P2X0 92 aa9.26□□□□□ -0.93
PTPRF-204ENST00000412568 PGPA6NDG6 321 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 CD5P06127 495 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 S100A4P26447 101 aaKnown RBP9.25□□□□□ -0.93
PTPRF-204ENST00000412568 FCGR2BP31994 310 aaPredicted RBP9.25□□□□□ -0.93
PTPRF-204ENST00000412568 CLDND2Q8NHS1 167 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 FAM106CPP0CH98 169 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 HOXA5P20719 270 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 ZNF788Q6ZQV5 615 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 CCL19Q99731 98 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 HTN1P15515 57 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 AGAP20933 346 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 COL8A2P25067 703 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 ATOH7Q8N100 152 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 ZNF738Q8NE65 137 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 ANAPC10Q9UM13 185 aa9.25□□□□□ -0.93
PTPRF-204ENST00000412568 TM4SF5O14894 197 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 TFPI2P48307 235 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 TMEM200BQ69YZ2 307 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 LYPD6Q86Y78 171 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 E7EQL1 145 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 IGLV3-1P01715 115 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 COL8A1P27658 744 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 PAFAH1B2P68402 229 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 ICAM4Q14773 271 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 COX19Q49B96 90 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 ZNF430Q9H8G1 570 aaPredicted RBP9.24□□□□□ -0.93
PTPRF-204ENST00000412568 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 AUP1Q9Y679 476 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 GRNP28799 593 aaKnown RBP9.24□□□□□ -0.93
PTPRF-204ENST00000412568 RPUSD1Q9UJJ7 312 aaKnown RBP9.24□□□□□ -0.93
PTPRF-204ENST00000412568 MED12LQ86YW9 2145 aa9.24□□□□□ -0.93
PTPRF-204ENST00000412568 TMEM178BH3BS89 294 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 APCSP02743 223 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 IL6RP08887 468 aaPredicted RBP9.23□□□□□ -0.93
PTPRF-204ENST00000412568 ADCYAP1P18509 176 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 KLRD1Q13241 179 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 PQLC2Q6ZP29 291 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 PRNTQ86SH4 94 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 ST6GALNAC3Q8NDV1 305 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 OR51G1Q8NGK1 321 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 OSR1Q8TAX0 266 aaPredicted RBP9.23□□□□□ -0.93
PTPRF-204ENST00000412568 LINC00527Q9UJ94 153 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 HIGD1AQ9Y241 93 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 TMEM131Q92545 1883 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 TNCP24821 2201 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 C9JQL5 133 aa9.23□□□□□ -0.93
PTPRF-204ENST00000412568 ZNF207O43670 478 aaKnown RBP9.23□□□□□ -0.93
PTPRF-204ENST00000412568 PRSS1P07477 247 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms