RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 A0A087WWC5 75 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 TM4SF4P48230 202 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 ICAM4Q14773 271 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 PSG3Q16557 428 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 ACP7Q6ZNF0 438 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 TULP4Q9NRJ4 1543 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 TRBV25-1A0A075B6N4 114 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 PROB1E7EW31 1015 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 ETV2O00321 342 aaPredicted RBP3.86□□□□□ -1.79
PTPN13-202ENST00000411767 C1QAP02745 245 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 HLA-DMBP28068 263 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 ZCCHC24Q8N2G6 241 aaKnown RBP3.86□□□□□ -1.79
PTPN13-202ENST00000411767 FBLIM1Q8WUP2 373 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 SPACA5Q96QH8 159 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 B9D2Q9BPU9 175 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 ICOSLGO75144 302 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 GCHFRP30047 84 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 UBE2D2P62837 147 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 PRCDQ00LT1 54 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 SLAQ13239 276 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 TRA2AQ13595 282 aaKnown RBP eCLIP3.86□□□□□ -1.79
PTPN13-202ENST00000411767 NUMA1Q14980 2115 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 TISP43B9A030 160 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 TRBV12-3P01733 135 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 DEFB121Q5J5C9 76 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 TMEM52Q8NDY8 209 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 MPLKIPQ8TAP9 179 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 MRPL36Q9P0J6 103 aaKnown RBP3.86□□□□□ -1.79
PTPN13-202ENST00000411767 TIMP1P01033 207 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 EFNB3Q15768 340 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 PDFQ9HBH1 243 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 NKX2-6A6NCS4 301 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 H0YGX0 51 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 APELAP0DMC3 54 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 CD200R1LQ6Q8B3 271 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 ZFP36L2P47974 494 aaKnown RBP3.85□□□□□ -1.79
PTPN13-202ENST00000411767 Q8N1Y9 231 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF488Q96MN9 340 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 PRSS22Q9GZN4 317 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 TSSC4Q9Y5U2 329 aaPredicted RBP3.85□□□□□ -1.79
PTPN13-202ENST00000411767 KIF20BQ96Q89 1820 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 TCRBV4S1A1TA0A5B7 111 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 ADAMTSL4Q6UY14 1074 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 GPHB5Q86YW7 130 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 C18orf12Q96KH6 178 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 AGMATQ9BSE5 352 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 KLF2Q9Y5W3 355 aaPredicted RBP3.85□□□□□ -1.79
PTPN13-202ENST00000411767 RFNGQ9Y644 331 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 NRXN3Q9Y4C0 1643 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 FAM189BP81408 668 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 PVRIGQ6DKI7 326 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 RPS27LQ71UM5 84 aaKnown RBP3.85□□□□□ -1.79
PTPN13-202ENST00000411767 ABCC6O95255 1503 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 C16orf97H3BN30 126 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 NBEAP1P0C6P0 100 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 LIM2P55344 173 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 FOXL2P58012 376 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 PSG7Q13046 419 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 FOXE3Q13461 319 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 Q8N9L7 120 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 DPM3Q9P2X0 92 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 ADGRB2O60241 1585 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 ALKQ9UM73 1620 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 A0A0A6YYD5 115 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 A0A0B4J2E0 115 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 A0A1B0GX12 115 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 RNF183Q96D59 192 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 SPSB2Q99619 263 aa3.85□□□□□ -1.79
PTPN13-202ENST00000411767 A0A0D9SEW6 157 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 TINCRA0A1B0GVN0 87 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 A6NNC1 897 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 NDUFS7O75251 213 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 ELANEP08246 267 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 GZMMP51124 257 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 RND3P61587 244 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 MS4A8Q9BY19 250 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 TTC3P53804 2025 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 TECPR2O15040 1411 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 IGHV3OR15-7A0A075B7D8 119 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 A0A087WUJ7 227 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 LTAP01374 205 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 CRYGCP07315 174 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 C1QL4Q86Z23 238 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 TPRX1Q8N7U7 411 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 ZIC4Q8N9L1 334 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 IMUPQ9GZP8 106 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 ZMAT4Q9H898 229 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 SLX4Q8IY92 1834 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 HIGD1CA8MV81 97 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 HCP5Q6MZN7 132 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 PCP2Q8IVA1 136 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 GLMPQ8WWB7 406 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 KLRG1Q96E93 195 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 TIMM17AQ99595 171 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 RNF5Q99942 180 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 CCL28Q9NRJ3 127 aa3.84□□□□□ -1.79
PTPN13-202ENST00000411767 NTN3O00634 580 aaPredicted RBP3.84□□□□□ -1.79
PTPN13-202ENST00000411767 CD27P26842 260 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms