RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 IGKV6D-41A0A0C4DH26 115 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 C19orf71A6NCJ1 209 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 TMEM212A6NML5 194 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 SLC22A1O15245 554 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 OR10J4P0C629 311 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 OGNP20774 298 aaKnown RBP2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 GLRXP35754 106 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 AQP4P55087 323 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 DEFA1P59665 94 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 TPI1P60174 286 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 CDC42P60953 191 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 RPS28P62857 69 aaKnown RBP2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 BAMBIQ13145 260 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 SURF2Q15527 256 aaPredicted RBP2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 BRMS1LQ5PSV4 323 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 HIST3H2BBQ8N257 126 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 TEX37Q96LM6 180 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 TM2D3Q9BRN9 247 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 DOHHQ9BU89 302 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 ZNF471Q9BX82 626 aaPredicted RBP2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 OR52A1Q9UKL2 312 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 TIMM9Q9Y5J7 89 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 ATRXP46100 2492 aa2.2□□□□□ -2.06
RNU4-78P-201ENST00000410940 TRIP11Q15643 1979 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 RIC1Q4ADV7 1423 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 IGKV1D-43A0A0B4J1Z2 117 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 M0QZK8 103 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 ZNF73O43830 326 aaPredicted RBP2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 SOD1P00441 154 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 ZNF728P0DKX0 622 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 COX6A1P12074 109 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 SRP14P37108 136 aaKnown RBP2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 PSMD8P48556 350 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 ZNF80P51504 273 aaPredicted RBP2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 FXYD2P54710 66 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 EIF5AP63241 154 aaKnown RBP2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 PLCXD2Q0VAA5 305 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 NDUFA5Q16718 116 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 DEFB115Q30KQ5 88 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 Q6ZS52 159 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 LYPD6Q86Y78 171 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 OR5J2Q8NH18 312 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 OR10J5Q8NHC4 309 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 TERB2Q8NHR7 220 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 GRPEL2Q8TAA5 225 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 THEM6Q8WUY1 208 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 MAFIPQ8WZ33 124 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 LZICQ8WZA0 190 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 BORCS5Q969J3 196 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 ADAT3Q96EY9 351 aaPredicted RBP2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 RSPO3Q9BXY4 272 aaPredicted RBP2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 TMEM133Q9H2Q1 129 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 C16orf95Q9H693 158 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 NHP2Q9NX24 153 aaKnown RBP2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 EPDR1Q9UM22 224 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 NUBP2Q9Y5Y2 271 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 CHD5Q8TDI0 1954 aa2.19□□□□□ -2.06
RNU4-78P-201ENST00000410940 DSCAML1Q8TD84 2053 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 TRGV10A0A0A0MS01 117 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 TRAV5A0A0B4J249 113 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 TRAV41A0A0B4J266 112 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 A0A0D9SG52 128 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 C7orf71A4D174 169 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 ARRDC5A6NEK1 342 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 TLCD2A6NGC4 264 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 CLDN25C9JDP6 229 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 BUB1B-PAK6H3BSN5 160 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 GNRH2O43555 120 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 IGKV3-11P04433 115 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 CSN2P05814 226 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 DBIP07108 87 aaKnown RBP2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 CCL5P13501 91 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 ZNF22P17026 224 aaPredicted RBP2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 HLA-DMBP28068 263 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 FUSP35637 526 aaKnown RBP eCLIP2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 SRP9P49458 86 aaKnown RBP2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 KRTAP25-1Q3LHN0 102 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 LINC01554Q52M75 96 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 IFT20Q8IY31 132 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 RPP25LQ8N5L8 163 aaKnown RBP2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 OR4C16Q8NGL9 310 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 TTTY13Q9BZ97 58 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 MRPL16Q9NX20 251 aaKnown RBP2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 PAIP2BQ9ULR5 123 aaKnown RBP2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 TIMM22Q9Y584 194 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 R4GN34 69 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 SCN4AP35499 1836 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 ANKRD12Q6UB98 2062 aa2.18□□□□□ -2.06
RNU4-78P-201ENST00000410940 A0A1B0GX51 115 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 G3V3Q6 166 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 TRAPPC2LH3BP13 241 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 CCR2P41597 374 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 LINC00315P59091 139 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 MYL5Q02045 173 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 CCDC153Q494R4 210 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 PRR9Q5T870 116 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 ZNF767PQ75MW2 155 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 SLC35E3Q7Z769 313 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 DEFB128Q7Z7B8 93 aa2.17□□□□□ -2.06
RNU4-78P-201ENST00000410940 OR5A1Q8NGJ0 315 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms