RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 FAAP20Q6NZ36 180 aa14.7□□□□□ -0.06
TSPAN4-209ENST00000409543 SLIRPQ9GZT3 109 aaKnown RBP14.7□□□□□ -0.06
TSPAN4-209ENST00000409543 C6orf62Q9GZU0 229 aaPredicted RBP14.7□□□□□ -0.06
TSPAN4-209ENST00000409543 EDA2RQ9HAV5 297 aa14.7□□□□□ -0.06
TSPAN4-209ENST00000409543 H3BMQ9 156 aa14.69□□□□□ -0.06
TSPAN4-209ENST00000409543 CASC10Q5T4H9 136 aa14.69□□□□□ -0.06
TSPAN4-209ENST00000409543 RRNAD1Q96FB5 475 aaKnown RBP14.69□□□□□ -0.06
TSPAN4-209ENST00000409543 RTBDNQ9BSG5 229 aaPredicted RBP14.69□□□□□ -0.06
TSPAN4-209ENST00000409543 HIPK2Q9H2X6 1198 aa14.69□□□□□ -0.06
TSPAN4-209ENST00000409543 RSL24D1Q9UHA3 163 aaKnown RBP14.69□□□□□ -0.06
TSPAN4-209ENST00000409543 C14orf166Q9Y224 244 aaKnown RBP14.69□□□□□ -0.06
TSPAN4-209ENST00000409543 C15orf62A8K5M9 175 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 NUPL2O15504 423 aaKnown RBP14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 ST8SIA3O43173 380 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 GSTZ1O43708 216 aaPredicted RBP14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 CDS2O95674 445 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 MT-CO2P00403 227 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 IFNA17P01571 189 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 LYL1P12980 280 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 RELQ04864 619 aaPredicted RBP14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 SPINK9Q5DT21 86 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 SLC35G3Q8N808 338 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 OR4C16Q8NGL9 310 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 ISOC1Q96CN7 298 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 PDCD10Q9BUL8 212 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 C20orf24Q9BUV8 137 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 TMEM222Q9H0R3 208 aa14.68□□□□□ -0.06
TSPAN4-209ENST00000409543 DNAH7Q8WXX0 4024 aa14.67□□□□□ -0.06
TSPAN4-209ENST00000409543 SNCAP37840 140 aa14.67□□□□□ -0.06
TSPAN4-209ENST00000409543 PINX1Q96BK5 328 aaKnown RBP14.67□□□□□ -0.06
TSPAN4-209ENST00000409543 ZNF414Q96IQ9 312 aa14.67□□□□□ -0.06
TSPAN4-209ENST00000409543 SPAG8Q99932 426 aaPredicted RBP14.67□□□□□ -0.06
TSPAN4-209ENST00000409543 PRRT1Q99946 306 aa14.67□□□□□ -0.06
TSPAN4-209ENST00000409543 SOSTQ9BQB4 213 aa14.67□□□□□ -0.06
TSPAN4-209ENST00000409543 NAA60Q9H7X0 242 aa14.67□□□□□ -0.06
TSPAN4-209ENST00000409543 GPR132Q9UNW8 380 aa14.67□□□□□ -0.06
TSPAN4-209ENST00000409543 TEX13DA0A0J9YY54 714 aaPredicted RBP14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 ANKRD20A5PA0PJZ0 165 aa14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 TSPAN4O14817 238 aa14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 OR5AC1P0C628 307 aa14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 TNFSF8P32971 234 aa14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 PVRIGQ6DKI7 326 aa14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 LAMTOR1Q6IAA8 161 aa14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 FAM219AQ8IW50 185 aa14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 GLYATL2Q8WU03 294 aa14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 NXF2Q9GZY0 626 aaKnown RBP14.66□□□□□ -0.06
TSPAN4-209ENST00000409543 IGHV3OR16-8A0A075B7F1 116 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 A0A0G2JRQ6 117 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 FABP12A6NFH5 140 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 ZNF207O43670 478 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 IGHV3-48P01763 117 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 ETV6P41212 452 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 SUB1P53999 127 aaKnown RBP eCLIP14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 DHODHQ02127 395 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 Q6ZRM9 215 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 OR51S1Q8NGJ8 323 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 MCFD2Q8NI22 146 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 RNASE11Q8TAA1 199 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 OR10C1Q96KK4 312 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 RETNQ9HD89 108 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 SMPXQ9UHP9 88 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 RYR3Q15413 4870 aa14.65□□□□□ -0.06
TSPAN4-209ENST00000409543 CRYM-AS1A6NIL9 109 aa14.64□□□□□ -0.07
TSPAN4-209ENST00000409543 GNG7O60262 68 aa14.64□□□□□ -0.07
TSPAN4-209ENST00000409543 RNASE2P10153 161 aaKnown RBP14.64□□□□□ -0.07
TSPAN4-209ENST00000409543 AARDQ4LEZ3 155 aa14.64□□□□□ -0.07
TSPAN4-209ENST00000409543 DUSP18Q8NEJ0 188 aa14.64□□□□□ -0.07
TSPAN4-209ENST00000409543 LHFPL5Q8TAF8 219 aa14.64□□□□□ -0.07
TSPAN4-209ENST00000409543 RBPMSQ93062 196 aaKnown RBP14.64□□□□□ -0.07
TSPAN4-209ENST00000409543 ENY2Q9NPA8 101 aa14.64□□□□□ -0.07
TSPAN4-209ENST00000409543 IGHV7-4-1A0A0J9YVY3 117 aa14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 CORTO00230 105 aa14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 YIF1AO95070 293 aa14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 NPBWR1P48145 328 aa14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 HOXA1P49639 335 aaPredicted RBP14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 SELENOHQ8IZQ5 122 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 OR52E5Q8NH55 327 aa14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 GGTLC1Q9BX51 225 aa14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 SCP2D1Q9UJQ7 156 aa14.63□□□□□ -0.07
TSPAN4-209ENST00000409543 LOC102724200A0A096LPH7 203 aaPredicted RBP14.62□□□□□ -0.07
TSPAN4-209ENST00000409543 SPCS3P61009 180 aa14.62□□□□□ -0.07
TSPAN4-209ENST00000409543 SCGB3A2Q96PL1 93 aa14.62□□□□□ -0.07
TSPAN4-209ENST00000409543 TRAV14DV4A0A0A6YYC5 116 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 OR4C46A6NHA9 309 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 CHEK1O14757 476 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 BSXQ3C1V8 233 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 TMEM268Q5VZI3 342 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 TMEM116Q8NCL8 245 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 FAM110AQ9BQ89 295 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 RHPN1-AS1Q9BWJ2 59 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 KCNIP3Q9Y2W7 256 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 TMEM56-RWDD3S4R434 201 aa14.61□□□□□ -0.07
TSPAN4-209ENST00000409543 TMEM50AO95807 157 aa14.6□□□□□ -0.07
TSPAN4-209ENST00000409543 ZFAND6Q6FIF0 208 aa14.6□□□□□ -0.07
TSPAN4-209ENST00000409543 IL22RA2Q969J5 263 aa14.6□□□□□ -0.07
TSPAN4-209ENST00000409543 TMEM230Q96A57 120 aa14.6□□□□□ -0.07
TSPAN4-209ENST00000409543 GPR146Q96CH1 333 aa14.6□□□□□ -0.07
TSPAN4-209ENST00000409543 GALNT14Q96FL9 552 aa14.6□□□□□ -0.07
TSPAN4-209ENST00000409543 RNF2Q99496 336 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms