RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 M0R296 226 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 MYF5P13349 255 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 LIFP15018 202 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 CCNOP22674 350 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 FOXL2P58012 376 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 MRPS21P82921 87 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 LPAL2Q16609 132 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 SLC23A3Q6PIS1 610 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 FAM214BQ7L5A3 538 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 UBALD1Q8TB05 177 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 ADTRPQ96IZ2 230 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 THYN1Q9P016 225 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 ACTL6BO94805 426 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 ERVK-16P61578 105 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 TIMM23BQ5SRD1 257 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 LINC00173Q6ZV60 143 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 PERPQ96FX8 193 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 C1orf159Q96HA4 380 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 NDFIP1Q9BT67 221 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 RABAC1Q9UI14 185 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 POLDIP2Q9Y2S7 368 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 ASCC3Q8N3C0 2202 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 TEX48A0A1B0GUV7 120 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 C5orf49A4QMS7 147 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 ZNF716A6NP11 495 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 DUX1O43812 170 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 SS18L1O75177 396 aaPredicted RBP4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 NGFP01138 241 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 DUTP33316 252 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 GPR12P47775 334 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 ZXDAP98168 799 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 FOXI2Q6ZQN5 318 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 TSTD1Q8NFU3 115 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 MRAP2Q96G30 205 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 FER1L6-AS2Q96M78 137 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 NABP2Q9BQ15 211 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 FGF21Q9NSA1 209 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 A1L4Q6 167 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 TRAT1Q6PIZ9 186 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 OR2Z1Q8NG97 314 aa4.8□□□□□ -1.64
R3HDM1-202ENST00000409478 C2CD4DB7Z1M9 353 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 ADH4P08319 380 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 FAM87AP0C7U9 286 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 FGF6P10767 208 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 GABRG2P18507 467 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 ZNF146Q15072 292 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 CT83Q5H943 113 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 RPS19BP1Q86WX3 136 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 BOD1L2Q8IYS8 172 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 SPEM1Q8N4L4 309 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 TEX45Q8NA69 505 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 MRPL32Q9BYC8 188 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 SPAG17Q6Q759 2223 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 TNRC6AQ8NDV7 1962 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 TEX50A0A1B0GTY4 177 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 LINC00473A8K010 186 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 C22orf46C9J442 243 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 H0Y8G0 127 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 CYC1P08574 325 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 IGFBP2P18065 325 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 CRYBA4P53673 196 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 OR1C1Q15619 314 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 SAMD5Q5TGI4 173 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 ABHD12Q8N2K0 398 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 ZNF503Q96F45 646 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 RTL8AQ9BWD3 113 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 ENY2Q9NPA8 101 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 OCIAD1Q9NX40 245 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 TSSC4Q9Y5U2 329 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 HTTP42858 3142 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 TRAV26-1A0A087WT03 109 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 IGHV1OR21-1A0A087WYE8 117 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 A0A1W2PPC4 97 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 C12orf77C9JDV5 145 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 SMIM13P0DJ93 91 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 C8orf88P0DMB2 117 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 FOXA3P55318 350 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 MEF2CQ06413 473 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 AESQ08117 197 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 CCDC144NLQ6NUI1 221 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 FAM222BQ8WU58 562 aa4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 AMMECR1Q9Y4X0 333 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-202ENST00000409478 F8W1H4 67 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 SMAD7O15105 426 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 CSN1S1P47710 185 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 GUSBP1Q15486 140 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 RLN3Q8WXF3 142 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 GFRA4Q9GZZ7 299 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 SIGLEC8Q9NYZ4 499 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 RP1P56715 2156 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 A8MWL6 223 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 K7EQM0 130 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 SNAI2O43623 268 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 ERVK11-1P61568 191 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 DEFB133Q30KQ1 61 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 RAB37Q96AX2 223 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 TCF19Q9Y242 345 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 HILPDAQ9Y5L2 63 aa4.78□□□□□ -1.64
R3HDM1-202ENST00000409478 APC2O95996 2303 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms