RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PRR20CP86479 221 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 PRR20DP86480 221 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 PRR20BP86481 221 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 PRR20AP86496 221 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 RELBQ01201 579 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 LTC4SQ16873 150 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 OR13A1Q8NGR1 328 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 CEP295Q9C0D2 2601 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 DOCK7Q96N67 2140 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 OR7C2O60412 319 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 ADH4P08319 380 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 IGFBP2P18065 325 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 COL8A2P25067 703 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 MRPL49Q13405 166 aaKnown RBP12.68□□□□□ -0.38
LIMS2-205ENST00000409455 Q6ZR03 302 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 SMIM15Q7Z3B0 74 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
LIMS2-205ENST00000409455 OR8B3Q8NGG8 313 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 Q8TCH9 128 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 OR8B2Q96RD0 313 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 COMMD5Q9GZQ3 224 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 TMEM140Q9NV12 185 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 HCFC1P51610 2035 aa12.68□□□□□ -0.38
LIMS2-205ENST00000409455 M0R1X1 148 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 SMPD2O60906 423 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 PPOXP50336 477 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 LRRC10Q5BKY1 277 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 EBLN2Q6P2I7 272 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 RNASEKQ6P5S7 137 aaKnown RBP12.67□□□□□ -0.38
LIMS2-205ENST00000409455 WIPF2Q8TF74 440 aaPredicted RBP12.67□□□□□ -0.38
LIMS2-205ENST00000409455 VPS25Q9BRG1 176 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 TECRQ9NZ01 308 aaKnown RBP12.67□□□□□ -0.38
LIMS2-205ENST00000409455 TRAV3A0A0B4J244 114 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 GGTLC3B5MD39 225 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 CA1P00915 261 aaPredicted RBP12.67□□□□□ -0.38
LIMS2-205ENST00000409455 SPACA3Q8IXA5 215 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 TRIB1Q96RU8 372 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 ENY2Q9NPA8 101 aa12.67□□□□□ -0.38
LIMS2-205ENST00000409455 IGLV2-8P01709 118 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 ALKBH6Q3KRA9 238 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 Q6ZS92 163 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 IGF2BP2-AS1Q96M15 143 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 OBP2BQ9NPH6 170 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 CLCF1Q9UBD9 225 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 GNG12Q9UBI6 72 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 SVILO95425 2214 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 M0QZ24 198 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 TAS2R45P59539 299 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 RTL8BQ17RB0 113 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 TRAT1Q6PIZ9 186 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 ZNF826PQ6ZT77 177 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 S1PR3Q99500 378 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 NABP2Q9BQ15 211 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 SSUH2Q9Y2M2 353 aa12.66□□□□□ -0.38
LIMS2-205ENST00000409455 TFF1P04155 84 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 MFAP2P55001 183 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 RBMXL3Q8N7X1 1067 aaKnown RBP12.65□□□□□ -0.38
LIMS2-205ENST00000409455 PRR7Q8TB68 274 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 SARAFQ96BY9 339 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 PLPPR2Q96GM1 343 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 ATMQ13315 3056 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 CBY3A6NI87 242 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 IQCF6A8MYZ5 107 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 PROP1O75360 226 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 RHOGP84095 191 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 KLF5Q13887 457 aaPredicted RBP12.65□□□□□ -0.38
LIMS2-205ENST00000409455 LDLRAD2Q5SZI1 272 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 ACP7Q6ZNF0 438 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 BCL2L2Q92843 193 aaPredicted RBP12.65□□□□□ -0.38
LIMS2-205ENST00000409455 TNFRSF19Q9NS68 423 aa12.65□□□□□ -0.38
LIMS2-205ENST00000409455 ANKRD11Q6UB99 2663 aaPredicted RBP12.65□□□□□ -0.38
LIMS2-205ENST00000409455 CACNA1GO43497 2377 aa12.65□□□□□ -0.39
LIMS2-205ENST00000409455 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-205ENST00000409455 C2orf70A6NJV1 201 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 C15orf61A6NNL5 157 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 AHRRA9YTQ3 701 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 RPS20P60866 119 aaKnown RBP12.64□□□□□ -0.39
LIMS2-205ENST00000409455 HOXA4Q00056 320 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-205ENST00000409455 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 NEUROG1Q92886 237 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 TMEM70Q9BUB7 260 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 SSBP3Q9BWW4 388 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-205ENST00000409455 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 TET2Q6N021 2002 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-205ENST00000409455 A0A1W2PRE2 83 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 C15orf65H3BRN8 121 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 CELA3BP08861 270 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 MPV17L2Q567V2 206 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 NHLRC2Q8NBF2 726 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 CST9LQ9H4G1 147 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 ST20Q9HBF5 79 aa12.64□□□□□ -0.39
LIMS2-205ENST00000409455 MAP1BP46821 2468 aaKnown RBP12.64□□□□□ -0.39
LIMS2-205ENST00000409455 FNDC10F2Z333 226 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 KIR2DS2P43631 304 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 RPL8P62917 257 aaKnown RBP12.63□□□□□ -0.39
LIMS2-205ENST00000409455 EDDM3AQ14507 147 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 RPL39P5Q59GN2 51 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 ALKBH2Q6NS38 261 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 FAM214BQ7L5A3 538 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms