RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 TRDV1A0A1B0GX56 115 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 TMEM235A6NFC5 223 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 CGB1A6NKQ9 187 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 MARCH11A6NNE9 402 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 DEFB4AO15263 64 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 S1PR2O95136 353 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 OR10A3P58181 314 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 DEFB131AP59861 70 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 ERHP84090 104 aaKnown RBP5.66□□□□□ -1.5
LSM5-202ENST00000409292 EIF4EBP1Q13541 118 aaPredicted RBP5.66□□□□□ -1.5
LSM5-202ENST00000409292 OGFRL1Q5TC84 451 aaPredicted RBP5.66□□□□□ -1.5
LSM5-202ENST00000409292 ZNF773Q6PK81 442 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 TMEM17Q86X19 198 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 OR10W1Q8NGF6 305 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 OR1P1Q8NH06 330 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 GIMAP1Q8WWP7 306 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 SLC25A46Q96AG3 418 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 MOB3AQ96BX8 217 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 GRAMD2BQ96HH9 432 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 CHRDL1Q9BU40 450 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 NDUFAF3Q9BU61 184 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 C1QTNF4Q9BXJ3 329 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 DUSP21Q9H596 190 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 DIABLOQ9NR28 239 aa5.66□□□□□ -1.5
LSM5-202ENST00000409292 IGHV3-49A0A0A0MS15 119 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 A0A0A6YYH2 397 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 TRAV3A0A0B4J244 114 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 A6NJ64 397 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 KRASP01116 189 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 CTSGP08311 255 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 F2RP25116 425 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 WT1-ASQ06250 92 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 KCTD21Q4G0X4 260 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 C22orf42Q6IC83 251 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 HOGA1Q86XE5 327 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 CADM3Q8N126 398 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 POM121L12Q8N7R1 296 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 OR4A16Q8NH70 328 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 OR10C1Q96KK4 312 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 NXF2Q9GZY0 626 aaKnown RBP5.65□□□□□ -1.5
LSM5-202ENST00000409292 VCX3BQ9H321 246 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 IFT46Q9NQC8 304 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 NDUFA4L2Q9NRX3 87 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 TMEM14BQ9NUH8 114 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 RHBDL2Q9NX52 303 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 TBC1D24Q9ULP9 559 aa5.65□□□□□ -1.5
LSM5-202ENST00000409292 TRAV18A0A075B6X5 111 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 DEFB131BA0A096LNP1 70 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 IGHV4-28A0A0C4DH34 117 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 K7EIM0 57 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 CORTO00230 105 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 NPPCP23582 126 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 SNCAP37840 140 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 LPAR6P43657 344 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 SUB1P53999 127 aaKnown RBP eCLIP5.64□□□□□ -1.512e-7■■■■□ 24.9
LSM5-202ENST00000409292 SCAND1P57086 179 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 BRWD1-AS2P59051 145 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 TBCEQ15813 527 aaPredicted RBP5.64□□□□□ -1.51
LSM5-202ENST00000409292 LEMD1Q68G75 181 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 LPCAT3Q6P1A2 487 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 ZNF600Q6ZNG1 722 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 Q6ZTC4 211 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 H2BFWTQ7Z2G1 175 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 OR5AP2Q8NGF4 316 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 PINX1Q96BK5 328 aaKnown RBP5.64□□□□□ -1.51
LSM5-202ENST00000409292 METTL26Q96S19 204 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 GPHA2Q96T91 129 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 PDCD10Q9BUL8 212 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 MS4A6AQ9H2W1 248 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 NDUFB11Q9NX14 153 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 ELF5Q9UKW6 265 aaPredicted RBP5.64□□□□□ -1.51
LSM5-202ENST00000409292 SSR3Q9UNL2 185 aa5.64□□□□□ -1.51
LSM5-202ENST00000409292 RRP15Q9Y3B9 282 aaKnown RBP5.64□□□□□ -1.51
LSM5-202ENST00000409292 IGHV3OR16-13A0A075B7E8 117 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 IGHV3-74A0A0B4J1X5 117 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 TEX48A0A1B0GUV7 120 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 HELTA6NFD8 242 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 ATG12O94817 140 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 MT-CO2P00403 227 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 AMBPP02760 352 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 RLN1P04808 185 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 AP2S1P53680 142 aaPredicted RBP5.63□□□□□ -1.51
LSM5-202ENST00000409292 TAS2R46P59540 309 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 LGALS9BQ3B8N2 356 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 FAM90A2PQ658T7 463 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 ZNF818PQ6ZRF7 136 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 Q8NAQ8 132 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 STXBP6Q8NFX7 210 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 OR6F1Q8NGZ6 308 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 TMEM230Q96A57 120 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 FAM210BQ96KR6 192 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 ENY2Q9NPA8 101 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 EHFQ9NZC4 300 aa5.63□□□□□ -1.51
LSM5-202ENST00000409292 HERC2O95714 4834 aa5.62□□□□□ -1.51
LSM5-202ENST00000409292 SMIM30A4D0T7 59 aa5.62□□□□□ -1.51
LSM5-202ENST00000409292 TMEM189A5PLL7 270 aa5.62□□□□□ -1.51
LSM5-202ENST00000409292 M0R2N4 97 aa5.62□□□□□ -1.51
LSM5-202ENST00000409292 GPR31O00270 319 aa5.62□□□□□ -1.51
LSM5-202ENST00000409292 SSX5O60225 188 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms