RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 COMPP49747 757 aaPredicted RBP10.72□□□□□ -0.69
PTPRN-202ENST00000409251 SLAQ13239 276 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 TSKUQ8WUA8 353 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 NUDT11Q96G61 164 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 OR4C46A6NHA9 309 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 LINC00473A8K010 186 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 MLNRO43193 412 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 OR9G9P0C7N8 305 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 MUC15Q8N387 334 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 ZADH2Q8N4Q0 377 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 FAM168AQ92567 244 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 YLPM1P49750 1951 aaKnown RBP10.72□□□□□ -0.69
PTPRN-202ENST00000409251 TRAV17A0A0B4J275 112 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 MT-CO2P00403 227 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 IGFBP2P18065 325 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 RPL39P5Q59GN2 51 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 TMEM42Q69YG0 159 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 CDC42EP3Q9UKI2 254 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 IGHV2OR16-5A0A0B4J2B6 119 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 C12orf77C9JDV5 145 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 PSPNO60542 156 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 IGHV1-2P23083 117 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 MLANAQ16655 118 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 NAV3Q8IVL0 2385 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 RAB31Q13636 194 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 OCIAD2Q56VL3 154 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 TREML4Q6UXN2 200 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 LINC00173Q6ZV60 143 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 NIT1Q86X76 327 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 ORAOV1Q8WV07 137 aa10.71□□□□□ -0.69
PTPRN-202ENST00000409251 NPY1RP25929 384 aa10.71□□□□□ -0.7
PTPRN-202ENST00000409251 LGALS4P56470 323 aa10.71□□□□□ -0.7
PTPRN-202ENST00000409251 SP5Q6BEB4 398 aaPredicted RBP10.71□□□□□ -0.7
PTPRN-202ENST00000409251 CLEC2AQ6UVW9 174 aa10.71□□□□□ -0.7
PTPRN-202ENST00000409251 Q8NFD4 153 aa10.71□□□□□ -0.7
PTPRN-202ENST00000409251 CHRDL1Q9BU40 450 aa10.71□□□□□ -0.7
PTPRN-202ENST00000409251 YPEL1O60688 119 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 IGLV2-14P01704 120 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 PRRX1P54821 245 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 YPEL2Q96QA6 119 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 HSPB7Q9UBY9 170 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 CORTO00230 105 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 DNPH1O43598 174 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 CRYABP02511 175 aaKnown RBP10.7□□□□□ -0.7
PTPRN-202ENST00000409251 FAM87AP0C7U9 286 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 UBE2G1P62253 170 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 RHOBP62745 196 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 AARDQ4LEZ3 155 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 PRR30Q53SZ7 412 aaPredicted RBP10.7□□□□□ -0.7
PTPRN-202ENST00000409251 RIPPLY2Q5TAB7 128 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 NUDT10Q8NFP7 164 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 ABHD17AQ96GS6 310 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 MGST2Q99735 147 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 ASCL2Q99929 193 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 REPIN1Q9BWE0 567 aaKnown RBP10.7□□□□□ -0.7
PTPRN-202ENST00000409251 A0A1W2PRD5 423 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 A0A1W2PRF3 423 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 A0A1W2PRM7 423 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 GNG7O60262 68 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 FXYD7P58549 80 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 YPEL3P61236 119 aaPredicted RBP10.7□□□□□ -0.7
PTPRN-202ENST00000409251 RNPS1Q15287 305 aaKnown RBP10.7□□□□□ -0.7
PTPRN-202ENST00000409251 SCCPDHQ8NBX0 429 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 DEFB108BQ8NET1 73 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 BSNQ9UPA5 3926 aa10.7□□□□□ -0.7
PTPRN-202ENST00000409251 AHRRA9YTQ3 701 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 SPINT2O43291 252 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 EFNB3Q15768 340 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 C1orf185Q5T7R7 199 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 ASCL4Q6XD76 172 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 IL19Q9UHD0 177 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 IGHV3-21A0A0B4J1V1 117 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 CDKN1BP46527 198 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 TCF24Q7RTU0 167 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 SLC25A40Q8TBP6 338 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 GGTLC1Q9BX51 225 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 CENPEQ02224 2701 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 GAGE12BA1L429 117 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 ITGB1BP1O14713 200 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 HAND1O96004 215 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 EBLN2Q6P2I7 272 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 FAM214BQ7L5A3 538 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 TIMM9Q9Y5J7 89 aa10.69□□□□□ -0.7
PTPRN-202ENST00000409251 WNK1Q9H4A3 2382 aa10.68□□□□□ -0.7
PTPRN-202ENST00000409251 K7ERU9 68 aa10.68□□□□□ -0.7
PTPRN-202ENST00000409251 ZNF207O43670 478 aaKnown RBP10.68□□□□□ -0.7
PTPRN-202ENST00000409251 UBE2L3P68036 154 aaKnown RBP10.68□□□□□ -0.7
PTPRN-202ENST00000409251 TMEM108Q6UXF1 575 aa10.68□□□□□ -0.7
PTPRN-202ENST00000409251 POM121L2Q96KW2 1035 aa10.68□□□□□ -0.7
PTPRN-202ENST00000409251 GAGE10A6NGK3 116 aa10.68□□□□□ -0.7
PTPRN-202ENST00000409251 OR5B21A6NL26 309 aa10.68□□□□□ -0.7
PTPRN-202ENST00000409251 TRAV9-2A0A087WT02 112 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 MPV17P39210 176 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 WDR73Q6P4I2 378 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 ZNF645Q8N7E2 425 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 METRNQ9UJH8 293 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 WDR83OSQ9Y284 106 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 M0R1B8 84 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms