RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 SMAD5-AS1Q9Y6J3 95 aa13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 I3L2K1 104 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 MT-CO2P00403 227 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 FOLR2P14207 255 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 VAMP1P23763 118 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 CCR6P51684 374 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 SRPXP78539 464 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 RBMS2Q15434 407 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 AARDQ4LEZ3 155 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 SPSB3Q6PJ21 355 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 LYZL2Q7Z4W2 148 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 OR52E5Q8NH55 327 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 DYNLRB2Q8TF09 96 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 B9D2Q9BPU9 175 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 A0A0B4J2A0 478 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 CENPXA8MT69 81 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 SULT1A3P0DMM9 295 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 SULT1A4P0DMN0 295 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 EDN2P20800 178 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 MFAP4P55083 255 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 LCN12Q6JVE5 192 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 CHRDL1Q9BU40 450 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 PALMDQ9NP74 551 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 GAR1Q9NY12 217 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 SHPKQ9UHJ6 478 aa13.61□□□□□ -0.23
PDLIM2-206ENST00000409141 F8W735 103 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 IGHV3-48P01763 117 aa13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 RNASE2P10153 161 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 IL7P13232 177 aa13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 CBLN1P23435 193 aa13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 UNQ9165/PRO28630Q6UXU0 137 aa13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 CENPSQ8N2Z9 138 aa13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 OR2K2Q8NGT1 345 aa13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 TXN2Q99757 166 aa13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 ZNF436Q9C0F3 470 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 HEYLQ9NQ87 328 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 UFC1Q9Y3C8 167 aa13.6□□□□□ -0.23
PDLIM2-206ENST00000409141 PIGBOS1A0A0B4J2F0 54 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 IZUMO1RA6ND01 250 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 A6NHS1 94 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 CEBPZOSA8MTT3 80 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 A8MWP6 167 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 CTSGP08311 255 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 DEFB114Q30KQ6 69 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 CD300EQ496F6 205 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 TM4SF20Q53R12 229 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 NMSQ5H8A3 153 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 UXS1Q8NBZ7 420 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 TECRQ9NZ01 308 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 CACFD1Q9UGQ2 172 aa13.59□□□□□ -0.23
PDLIM2-206ENST00000409141 TMEM213A2RRL7 107 aa13.58□□□□□ -0.24
PDLIM2-206ENST00000409141 NDUFB6O95139 128 aa13.58□□□□□ -0.24
PDLIM2-206ENST00000409141 NXPH3O95157 252 aa13.58□□□□□ -0.24
PDLIM2-206ENST00000409141 SFT2D2O95562 160 aa13.58□□□□□ -0.24
PDLIM2-206ENST00000409141 ADMP35318 185 aa13.58□□□□□ -0.24
PDLIM2-206ENST00000409141 SMCO1Q147U7 214 aa13.58□□□□□ -0.24
PDLIM2-206ENST00000409141 CACNG8Q8WXS5 425 aa13.58□□□□□ -0.24
PDLIM2-206ENST00000409141 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-206ENST00000409141 CORTO00230 105 aa13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 NDUFA4O00483 81 aa13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 NUPL2O15504 423 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 FCGR2BP31994 310 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 HTR2BP41595 481 aa13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 ELLP55199 621 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 PPP1R1AQ13522 171 aa13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 ANKRD55Q3KP44 614 aa13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 PVRIGQ6DKI7 326 aa13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 DUSP18Q8NEJ0 188 aa13.57□□□□□ -0.24
PDLIM2-206ENST00000409141 A0A1B0GU03 582 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 DUXBA0A1W2PPF3 345 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 GNG7O60262 68 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 NPBWR1P48145 328 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 CNPY1Q3B7I2 92 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 BSXQ3C1V8 233 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 Q8N1Y9 231 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 LRTM2Q8N967 370 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 TMEM190Q8WZ59 177 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 MARC2Q969Z3 335 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 C20orf24Q9BUV8 137 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 HIPK2Q9H2X6 1198 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 MRPL27Q9P0M9 148 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 SELENOKQ9Y6D0 94 aa13.56□□□□□ -0.24
PDLIM2-206ENST00000409141 UBE2MP61081 183 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 RELQ04864 619 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 GTSCR1Q86UQ5 136 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 OR1S1Q8NH92 325 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 MLXQ9UH92 298 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 FLVCR2Q9UPI3 526 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 IGHV3OR16-8A0A075B7F1 116 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 ZNF785A8K8V0 405 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 C8orf88P0DMB2 117 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 BTCP35070 178 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 OPRK1P41145 380 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 TNFRSF9Q07011 255 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 GUCA2BQ16661 112 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 C2orf83Q53S99 150 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 LINC00299Q6ZSB3 139 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 ASCL2Q99929 193 aa13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 DAZ1Q9NQZ3 744 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-206ENST00000409141 HSPB7Q9UBY9 170 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms