RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 WISP1O95388 367 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 TMEM105Q8N8V8 129 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
SSFA2-202ENST00000409001 MUC21A0A0G2JKD1 596 aa13.16□□□□□ -0.3
SSFA2-202ENST00000409001 MUC21A0A140T8X8 626 aa13.16□□□□□ -0.3
SSFA2-202ENST00000409001 SRSF4Q08170 494 aaKnown RBP13.16□□□□□ -0.3
SSFA2-202ENST00000409001 MUC21Q5SSG8 566 aa13.16□□□□□ -0.3
SSFA2-202ENST00000409001 CACNG8Q8WXS5 425 aa13.16□□□□□ -0.3
SSFA2-202ENST00000409001 PRB3Q04118 309 aaPredicted RBP13.16□□□□□ -0.3
SSFA2-202ENST00000409001 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
SSFA2-202ENST00000409001 HIST1H2BLQ99880 126 aa13.16□□□□□ -0.3
SSFA2-202ENST00000409001 KLK15Q9H2R5 256 aa13.16□□□□□ -0.3
SSFA2-202ENST00000409001 OR10J6PQ8NGY7 276 aa13.16□□□□□ -0.3
SSFA2-202ENST00000409001 F11RQ9Y624 299 aaKnown RBP13.16□□□□□ -0.3
SSFA2-202ENST00000409001 M0R3E3 92 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 CX3CL1P78423 397 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 ST6GALNAC6Q969X2 333 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 LOC105371242A0A075B767 164 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 C15orf61A6NNL5 157 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 IGKV1-5P01602 117 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 SPRR3Q9UBC9 169 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 THADAQ6YHU6 1953 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 BSPH1Q075Z2 132 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 IGHV3OR16-8A0A075B7F1 116 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 B9A039 149 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 E9PLN8 166 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 TM4SF20Q53R12 229 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 TMEM136Q6ZRR5 245 aa13.15□□□□□ -0.3
SSFA2-202ENST00000409001 UPK2O00526 184 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 ADMP35318 185 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 PSG9Q00887 426 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 FOXF2Q12947 444 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 TRBV24-1A0A075B6N3 115 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 IGHV3-49A0A0A0MS15 119 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 FOXI3A8MTJ6 420 aaPredicted RBP13.14□□□□□ -0.31
SSFA2-202ENST00000409001 HIGD1CA8MV81 97 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 H3BVH4 76 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 FAM90A1Q86YD7 464 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 C1QL4Q86Z23 238 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 OR1N2Q8NGR9 330 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 ZNF524Q96C55 264 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
SSFA2-202ENST00000409001 LINC00312Q9Y6C7 94 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 LILRA1O75019 489 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 EFNB3Q15768 340 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 FNDC1Q4ZHG4 1894 aaPredicted RBP13.14□□□□□ -0.31
SSFA2-202ENST00000409001 SNAI2O43623 268 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 SS18L1O75177 396 aaPredicted RBP13.14□□□□□ -0.31
SSFA2-202ENST00000409001 IGHV3-23P01764 117 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 TAS2R60P59551 318 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 TMEM42Q69YG0 159 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 NRN1Q9NPD7 142 aa13.14□□□□□ -0.31
SSFA2-202ENST00000409001 FABP2P12104 132 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 SELLP14151 372 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 RPS20P60866 119 aaKnown RBP13.13□□□□□ -0.31
SSFA2-202ENST00000409001 NDUFAF3Q9BU61 184 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 C17orf100A8MU93 164 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 NUDT3O95989 172 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 APOBEC3AP31941 199 aaPredicted RBP13.13□□□□□ -0.31
SSFA2-202ENST00000409001 ID1P41134 155 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 HIST3H2BBQ8N257 126 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 PYYP10082 97 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 JOSD1Q15040 202 aaPredicted RBP13.13□□□□□ -0.31
SSFA2-202ENST00000409001 C7orf71A4D174 169 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 GNG5P63218 68 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 TEX38Q6PEX7 206 aa13.13□□□□□ -0.31
SSFA2-202ENST00000409001 SSBP4Q9BWG4 385 aaPredicted RBP13.13□□□□□ -0.31
SSFA2-202ENST00000409001 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 UCNP55089 124 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 MEF2CQ06413 473 aaPredicted RBP13.12□□□□□ -0.31
SSFA2-202ENST00000409001 C18orf15Q96N68 181 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 DPM3Q9P2X0 92 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 C9JQL5 133 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 TREML4Q6UXN2 200 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 GPR82Q96P67 336 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 TRAV1-1A0A0B4J248 108 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 Q0VFX4 171 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 RNASEH2CQ8TDP1 164 aaKnown RBP13.12□□□□□ -0.31
SSFA2-202ENST00000409001 ELOVL5Q9NYP7 299 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 SEMA5BQ9P283 1151 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 SRSF7Q16629 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
SSFA2-202ENST00000409001 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 LEMD1Q68G75 181 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 PRDM13Q9H4Q3 707 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 BDP1A6H8Y1 2624 aa13.12□□□□□ -0.31
SSFA2-202ENST00000409001 TRAV9-1A0A075B6T8 112 aa13.11□□□□□ -0.31
SSFA2-202ENST00000409001 IL18BPO95998 194 aa13.11□□□□□ -0.31
SSFA2-202ENST00000409001 LINC00469Q8N7U9 141 aa13.11□□□□□ -0.31
SSFA2-202ENST00000409001 RPP21Q9H633 154 aaKnown RBP13.11□□□□□ -0.31
SSFA2-202ENST00000409001 APOHP02749 345 aaPredicted RBP13.11□□□□□ -0.31
SSFA2-202ENST00000409001 TEX45Q8NA69 505 aa13.11□□□□□ -0.31
SSFA2-202ENST00000409001 VOPP1Q96AW1 172 aa13.11□□□□□ -0.31
SSFA2-202ENST00000409001 IGHV1-18A0A0C4DH31 117 aa13.11□□□□□ -0.31
SSFA2-202ENST00000409001 A0A0G2JRQ6 117 aa13.11□□□□□ -0.31
SSFA2-202ENST00000409001 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
SSFA2-202ENST00000409001 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms