RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SLC25A22Q9H936 323 aa10.46□□□□□ -0.73
SMARCB1-203ENST00000407082 TGP01266 2768 aa10.46□□□□□ -0.74
SMARCB1-203ENST00000407082 hCG_1809904A0A1W2PP81 198 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 A0A1W2PR64 198 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 A0A1W2PRV1 198 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 INS-IGF2F8WCM5 200 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 TNFRSF13BO14836 293 aaPredicted RBP10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 TGFAP01135 160 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 CT45A6P0DMU7 189 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 CT45A5P0DMU8 189 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 CT45A7P0DMV0 189 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 SRP14P37108 136 aaKnown RBP10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 AKR1D1P51857 326 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 PRRX1P54821 245 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 HABP2Q14520 560 aaPredicted RBP10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 C2orf83Q53S99 150 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 SPINK9Q5DT21 86 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 TMEM200BQ69YZ2 307 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 TCF23Q7RTU1 214 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 IQCF2Q8IXL9 164 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 LINC00518Q8N0U6 118 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 C3orf56Q8N813 242 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 OR4C13Q8NGP0 309 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 OR1L8Q8NGR8 309 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 OR10X1Q8NGY0 326 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 OR4F5Q8NH21 305 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 OR9G1Q8NH87 305 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 C10orf105Q8TEF2 133 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 LEAP2Q969E1 77 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 ISOC2Q96AB3 205 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 FLYWCH2Q96CP2 140 aaKnown RBP10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 SLC35E1Q96K37 410 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 OR5B12Q96R08 314 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 OR4F4Q96R69 305 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 RNF2Q99496 336 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 PIMREGQ9BSJ6 248 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 COMMD5Q9GZQ3 224 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 PXMP4Q9Y6I8 212 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 DOCK11Q5JSL3 2073 aa10.45□□□□□ -0.74
SMARCB1-203ENST00000407082 A0A087X0M5 115 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 A0A1B0GX30 115 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 A0A1W2PPE3 182 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 PRSS46E5RG02 174 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 NDUFS8O00217 210 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 RRHO14718 337 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 PPP1R2P9O14990 202 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 CLN5O75503 358 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 IGKV1D-33P01593 117 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 IGKV1-33P01594 117 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 IGHV3-7P01780 117 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 FBP1P09467 338 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 GPX4P36969 197 aaPredicted RBP10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 RPS10P46783 165 aaKnown RBP10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 RND2P52198 227 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 LINC00205P59089 165 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 WDR25Q64LD2 544 aaPredicted RBP10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 ABHD12Q8N2K0 398 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 OR5AN1Q8NGI8 311 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 CACNG8Q8WXS5 425 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 DCAF16Q9NXF7 216 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 METTL1Q9UBP6 276 aaKnown RBP10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 ARL2-SNX15V9GYD0 113 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 TENM1Q9UKZ4 2725 aa10.44□□□□□ -0.74
SMARCB1-203ENST00000407082 TRAV3A0A0B4J244 114 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 AP4M1O00189 453 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 CA2P00918 260 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 RBP4P02753 201 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 GPR6P46095 362 aaPredicted RBP10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 LGALS7P47929 136 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 ZNF137PP52743 207 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 CD81P60033 236 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 ELOBQ15370 118 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 BSXQ3C1V8 233 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 VMA21Q3ZAQ7 101 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 SSX7Q7RTT5 188 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 TMEM144Q7Z5S9 345 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 VKORC1L1Q8N0U8 176 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 SGMS2Q8NHU3 365 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 TIMD4Q96H15 378 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 HARBI1Q96MB7 349 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 YPEL4Q96NS1 127 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 SSX3Q99909 188 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 GGTLC1Q9BX51 225 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 HINT2Q9BX68 163 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 WASHC3Q9Y3C0 194 aa10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 LSM4Q9Y4Z0 139 aaKnown RBP10.43□□□□□ -0.74
SMARCB1-203ENST00000407082 TEX50A0A1B0GTY4 177 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 C5orf52A6NGY3 159 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 C11orf94C9JXX5 98 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 UBE2CO00762 179 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 DVL1O14640 695 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 PAGE4O60829 102 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 STAG3L2P0CL84 134 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 STAG3L3P0CL85 134 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 TAS2R45P59539 299 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 B2MP61769 119 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 RPL8P62917 257 aaKnown RBP10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 ZNF674Q2M3X9 581 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 DUX4L9Q6RFH8 374 aaPredicted RBP10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 ZFP82Q8N141 532 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms