RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 IGHV4OR15-8A0A075B7B6 117 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 A0A087WW49 117 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 K7EIM0 57 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 SYNGR2O43760 224 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 MED6O75586 246 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 PF4P02776 101 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 HSPB1P04792 205 aaKnown RBP12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 IAPPP10997 89 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 HTR2BP41595 481 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 NKX2-1P43699 371 aaPredicted RBP12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 SUB1P53999 127 aaKnown RBP eCLIP12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 POLR2GP62487 172 aaKnown RBP eCLIP12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 FHL3Q13643 280 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 DPF1Q92782 380 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 C2orf50Q96LR7 162 aa12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 PEF1Q9UBV8 284 aaKnown RBP12.95□□□□□ -0.34
HMGA1P7-201ENST00000406908 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 I3L2K1 104 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 WRBO00258 174 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 GOSR2O14653 212 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 SIX6O95475 246 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 ZNF616Q08AN1 781 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 IL15RAQ13261 267 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 C2orf83Q53S99 150 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 GSG1LQ6UXU4 331 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 SLC24A4Q8NFF2 622 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 VN1R17PQ8TDU5 208 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 EEF1AKMT3Q96AZ1 226 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 PINX1Q96BK5 328 aaKnown RBP12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 CXorf58Q96LI9 332 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 CCDC140Q96MF4 163 aa12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 RANGRFQ9HD47 186 aaPredicted RBP12.94□□□□□ -0.34
HMGA1P7-201ENST00000406908 LINC01619G3V211 115 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 SSNA1O43805 119 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 SCGB1D2O95969 90 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 MT-CO2P00403 227 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 IFNA10P01566 189 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 MBPP02686 304 aaPredicted RBP12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 MLANAQ16655 118 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 TREML4Q6UXN2 200 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 CLEC19AQ6UXS0 136 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 LINC00482Q8N8I6 264 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 ZNF502Q8TBZ5 544 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 U3KQ87 197 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 NOTCH3Q9UM47 2321 aa12.93□□□□□ -0.34
HMGA1P7-201ENST00000406908 TRBV7-1A0A0A6YYK4 115 aa12.92□□□□□ -0.34
HMGA1P7-201ENST00000406908 IGHV3-48P01763 117 aa12.92□□□□□ -0.34
HMGA1P7-201ENST00000406908 CLEC3BP05452 202 aa12.92□□□□□ -0.34
HMGA1P7-201ENST00000406908 NPY1RP25929 384 aa12.92□□□□□ -0.34
HMGA1P7-201ENST00000406908 SLURP1P55000 103 aa12.92□□□□□ -0.34
HMGA1P7-201ENST00000406908 WFDC9Q8NEX5 89 aa12.92□□□□□ -0.34
HMGA1P7-201ENST00000406908 CIB3Q96Q77 187 aaPredicted RBP12.92□□□□□ -0.34
HMGA1P7-201ENST00000406908 C21orf62Q9NYP8 219 aa12.92□□□□□ -0.34
HMGA1P7-201ENST00000406908 C15orf62A8K5M9 175 aa12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 PPP5D1E7EU14 171 aa12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 F8W735 103 aaPredicted RBP12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 CORTO00230 105 aa12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 BMPR1BO00238 502 aa12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 TMEM50AO95807 157 aa12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 PAX9P55771 341 aa12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 WDR89Q96FK6 387 aaPredicted RBP12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 FNDC4Q9H6D8 234 aaPredicted RBP12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 RCL1Q9Y2P8 373 aaKnown RBP12.91□□□□□ -0.34
HMGA1P7-201ENST00000406908 CMYA5Q8N3K9 4069 aa12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 K7EPK0 472 aa12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 SSSCA1O60232 199 aa12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 OR8U8P0C7N1 319 aa12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 H2BFSP57053 126 aa12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 NOXA1Q86UR1 476 aa12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 SMIM8Q96KF7 97 aa12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 OR4C12Q96R67 309 aa12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 MRPL36Q9P0J6 103 aaKnown RBP12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 MGAT4CQ9UBM8 478 aa12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 LSM5Q9Y4Y9 91 aaKnown RBP12.9□□□□□ -0.34
HMGA1P7-201ENST00000406908 H3BP45 60 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 HOXD3P31249 432 aaPredicted RBP12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 GPR183P32249 361 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 OPRK1P41145 380 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 MFAP4P55083 255 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 ATP5IP56385 69 aaPredicted RBP12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 RAB32Q13637 225 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 SPANXN5Q5MJ07 72 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 RNASEH2CQ8TDP1 164 aaKnown RBP12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 DCUN1D4Q92564 292 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 DLX4Q92988 240 aaPredicted RBP12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 RAB40CQ96S21 281 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 ZC4H2Q9NQZ6 224 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 PSENENQ9NZ42 101 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 VWFP04275 2813 aa12.89□□□□□ -0.35
HMGA1P7-201ENST00000406908 OR2T8A6NH00 312 aa12.88□□□□□ -0.35
HMGA1P7-201ENST00000406908 GGCTO75223 188 aaKnown RBP12.88□□□□□ -0.35
HMGA1P7-201ENST00000406908 OR2C1O95371 312 aa12.88□□□□□ -0.35
HMGA1P7-201ENST00000406908 LY86O95711 162 aa12.88□□□□□ -0.35
HMGA1P7-201ENST00000406908 IFNA4P05014 189 aa12.88□□□□□ -0.35
HMGA1P7-201ENST00000406908 CXCL3P19876 107 aa12.88□□□□□ -0.35
HMGA1P7-201ENST00000406908 ZP3P21754 424 aa12.88□□□□□ -0.35
HMGA1P7-201ENST00000406908 ARL3P36405 182 aa12.88□□□□□ -0.35
HMGA1P7-201ENST00000406908 KLF5Q13887 457 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms