RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 E9PLN8 166 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 GPR183P32249 361 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 HERPUD1Q15011 391 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 ASCL4Q6XD76 172 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 VKORC1Q9BQB6 163 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 IGHV3-66A0A0C4DH42 116 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 IGKV3OR2-268A0A0C4DH90 116 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 IGHV1-46P01743 117 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 OTX1P32242 354 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 GCSAMLQ5JQS6 135 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 SPACA3Q8IXA5 215 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 NBR2O15453 112 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 TMEM183AQ8IXX5 376 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 PLSCR4Q9NRQ2 329 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 F8VVB4 439 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 F8VWA3 439 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 A0A0G2JLM5 398 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 RAMP3O60896 148 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 SLC25A34Q6PIV7 304 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 LINC00518Q8N0U6 118 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 ARFGEF3Q5TH69 2177 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 TRIOBPQ9H2D6 2365 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 C7orf69Q9H7B7 122 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 LDLRAD4O15165 306 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 TBR1Q16650 682 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 FAM74A4Q5TZK3 123 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 LRTM2Q8N967 370 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 NYNRINQ9P2P1 1898 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 CADP27708 2225 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 A1L4Q6 167 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 TIMP3P35625 211 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 OR4D5Q8NGN0 318 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 TRAV21A0A0B4J279 112 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 DUTP33316 252 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 FOXA3P55318 350 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 SRSF7Q16629 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 SPTA1P02549 2419 aa11.09□□□□□ -0.63
CACNA1C-222ENST00000406454 IGKV1-27A0A075B6S5 117 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 A0A087WWC5 75 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 DDTP30046 118 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 FMC1Q96HJ9 113 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 MYOFQ9NZM1 2061 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 ANKRD36A6QL64 1941 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 ZNF56Q15929 161 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 TMEM249Q2WGJ8 235 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 C12orf54Q6X4T0 127 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 SMAD7O15105 426 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 LHFPL1Q86WI0 220 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 ARTNQ5T4W7 220 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 IGKV3-20P01619 116 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 CLEC19AQ6UXS0 136 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 TMEM70Q9BUB7 260 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 PNRC2Q9NPJ4 139 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 LYNX1G3V0Z9 82 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 LYNX1P0DP58 116 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 CITED1Q99966 193 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 KLK15Q9H2R5 256 aa11.08□□□□□ -0.64
CACNA1C-222ENST00000406454 BMPERQ8N8U9 685 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 BEX4Q9NWD9 120 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 THBDP07204 575 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 OR9G9P0C7N8 305 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 RPP21Q9H633 154 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 SRRM5B3KS81 715 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 PRSS2P07478 247 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 PRB3Q04118 309 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 FGF16O43320 207 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 Q9H3A6 140 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 IGHV3OR16-8A0A075B7F1 116 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 ATRAIDQ6UW56 229 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 KIR2DL4Q99706 377 aa11.07□□□□□ -0.64
CACNA1C-222ENST00000406454 CEP290O15078 2479 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 FAM90A9PA6NNJ1 464 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 CD69Q07108 199 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 LHFPL4Q7Z7J7 247 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 WFDC1Q9HC57 220 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 FABP2P12104 132 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 MDS2Q8NDY4 140 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 CD55P08174 381 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 RPL23P62829 140 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 FAM166AQ6J272 317 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 MRPS16Q9Y3D3 137 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 ASIPP42127 132 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 IMMP2LQ96T52 175 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 IL18BPO95998 194 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 DNLZQ5SXM8 178 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 CIARTQ8N365 385 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 PRELID3AQ96N28 172 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 DMRT1Q9Y5R6 373 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 TRAV9-1A0A075B6T8 112 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 SOD3P08294 240 aa11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 TBL2Q9Y4P3 447 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-222ENST00000406454 PDCD11Q14690 1871 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-222ENST00000406454 C5orf63A6NC05 138 aa11.05□□□□□ -0.64
CACNA1C-222ENST00000406454 WDR83OSQ9Y284 106 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms