RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 BET1LQ9NYM9 111 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 HSPB7Q9UBY9 170 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 FAM106AQ4KMX7 169 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 DPPA3Q6W0C5 159 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 Q6ZSR3 168 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 LHFPL4Q7Z7J7 247 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 GATAD1Q8WUU5 269 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 NRGNQ92686 78 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 CYYR1Q96J86 154 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 CTSZQ9UBR2 303 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 JMJD1CQ15652 2540 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 A0A0G2JRQ6 117 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 OOSP1A8MZH6 123 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 ZNF207O43670 478 aaKnown RBP7.43□□□□□ -1.22
LIG4-202ENST00000405925 MYOD1P15172 320 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 HIST1H1BP16401 226 aaKnown RBP7.43□□□□□ -1.22
LIG4-202ENST00000405925 PRSS8Q16651 343 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 C17orf58Q2M2W7 97 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 RPEL1Q2QD12 228 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 LRRC75BQ2VPJ9 315 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 Q96MF0 132 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 TRAV20A0A0B4J274 112 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 LINC00862A6NCI5 91 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 IL6RP08887 468 aaPredicted RBP7.43□□□□□ -1.22
LIG4-202ENST00000405925 CYP2G1PQ6ZSU1 146 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 BAGE3Q86Y29 109 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 BAGE2Q86Y30 109 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 CYB561D1Q8N8Q1 229 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 LINC01356Q8N9X3 169 aa7.43□□□□□ -1.22
LIG4-202ENST00000405925 C22orf46C9J442 243 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 CLDN34H7C241 214 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 M0QZK8 103 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 GATCO43716 136 aaKnown RBP7.42□□□□□ -1.22
LIG4-202ENST00000405925 ARL14EPLP0DKL9 152 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 MEF2BQ02080 365 aaPredicted RBP7.42□□□□□ -1.22
LIG4-202ENST00000405925 LYPD6Q86Y78 171 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 RNASEH2CQ8TDP1 164 aaKnown RBP7.42□□□□□ -1.22
LIG4-202ENST00000405925 CACNG8Q8WXS5 425 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 RCC1LQ96I51 464 aaKnown RBP7.42□□□□□ -1.22
LIG4-202ENST00000405925 PSMG3Q9BT73 122 aaPredicted RBP7.42□□□□□ -1.22
LIG4-202ENST00000405925 COL5A1P20908 1838 aaPredicted RBP7.42□□□□□ -1.22
LIG4-202ENST00000405925 WNK1Q9H4A3 2382 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 TEX50A0A1B0GTY4 177 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 SERTM2A0A1B0GWG4 89 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 PGPA6NDG6 321 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 HELTA6NFD8 242 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 DANCRP0C864 163 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 RUSC1-AS1Q66K80 236 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 Q6ZRM9 215 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 GGACTQ9BVM4 153 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 ANAPC10Q9UM13 185 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 A0A1W2PS18 150 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 SH2D7A6NKC9 451 aaPredicted RBP7.42□□□□□ -1.22
LIG4-202ENST00000405925 NPPCP23582 126 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 MAS1LP35410 378 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 FABP9Q0Z7S8 132 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 ZNF585BQ52M93 769 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 AWAT1Q58HT5 328 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 CLEC19AQ6UXS0 136 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 BSCL2Q96G97 398 aaPredicted RBP7.42□□□□□ -1.22
LIG4-202ENST00000405925 PRSS22Q9GZN4 317 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 KAAG1Q9UBP8 84 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 NAT8Q9UHE5 227 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 CDH23Q9H251 3354 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 A0A0G2JLM5 398 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.42□□□□□ -1.22
LIG4-202ENST00000405925 PDE6DO43924 150 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 TCL1AP56279 114 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 GUCA2BQ16661 112 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 TMEM144Q7Z5S9 345 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 C11orf44Q8N8P7 122 aa7.42□□□□□ -1.22
LIG4-202ENST00000405925 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
LIG4-202ENST00000405925 G3V3Q6 166 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 C15orf65H3BRN8 121 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 CTRB1P17538 263 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 RPL7P18124 248 aaKnown RBP7.41□□□□□ -1.22
LIG4-202ENST00000405925 RHOGP84095 191 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 RELQ04864 619 aaPredicted RBP7.41□□□□□ -1.22
LIG4-202ENST00000405925 C5orf64Q2M2E5 130 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 CYB5R2Q6BCY4 276 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 CTRB2Q6GPI1 263 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 TMEM167AQ8TBQ9 72 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 C16orf92Q96LL3 132 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 MOB4Q9Y3A3 225 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 KLF2Q9Y5W3 355 aaPredicted RBP7.41□□□□□ -1.22
LIG4-202ENST00000405925 DSCAMO60469 2012 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 IGHV2-70DA0A0C4DH43 119 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 AP4M1O00189 453 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 ITGB1BP1O14713 200 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 NDUFB4O95168 129 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 HTN1P15515 57 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 NDUFA6P56556 154 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 S100A12P80511 92 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 CD69Q07108 199 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 KLF17Q5JT82 389 aaPredicted RBP7.41□□□□□ -1.22
LIG4-202ENST00000405925 LINC00305Q7Z4B0 112 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 PPP1R2P9O14990 202 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 CX3CL1P78423 397 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 PNRC1Q12796 327 aaPredicted RBP7.41□□□□□ -1.22
LIG4-202ENST00000405925 ZNF880Q6PDB4 577 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms