RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 RASL11BQ9BPW5 248 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 PFDN2Q9UHV9 154 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 SMCO3A2RU48 225 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 C17orf112F2Z3M2 114 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 SOX15O60248 233 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 HLA-DRB1P01911 266 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 PRH1P02810 166 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 SRD5A1P18405 259 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 HNF1AP20823 631 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 GPX4P36969 197 aaPredicted RBP16.68■□□□□ 0.26
TPM1-208ENST00000404484 SERF2P84101 59 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 FBLN7Q53RD9 439 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 AKR1C8PQ5T2L2 129 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 TMEM182Q6ZP80 229 aaPredicted RBP16.68■□□□□ 0.26
TPM1-208ENST00000404484 Q8N9W7 124 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 ABHD5Q8WTS1 349 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 CACNG8Q8WXS5 425 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 P2RX4Q99571 388 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 NPVFQ9HCQ7 196 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 WDR83OSQ9Y284 106 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 CORTO00230 105 aa16.67■□□□□ 0.26
TPM1-208ENST00000404484 CENPVQ7Z7K6 275 aaPredicted RBP16.67■□□□□ 0.26
TPM1-208ENST00000404484 SSMEM1Q8WWF3 244 aa16.67■□□□□ 0.26
TPM1-208ENST00000404484 ARPC1AQ92747 370 aa16.67■□□□□ 0.26
TPM1-208ENST00000404484 SSX3Q99909 188 aa16.67■□□□□ 0.26
TPM1-208ENST00000404484 MOB4Q9Y3A3 225 aa16.67■□□□□ 0.26
TPM1-208ENST00000404484 MDKP21741 143 aaPredicted RBP16.66■□□□□ 0.26
TPM1-208ENST00000404484 BTNL8Q6UX41 500 aa16.66■□□□□ 0.26
TPM1-208ENST00000404484 DPPA3Q6W0C5 159 aa16.66■□□□□ 0.26
TPM1-208ENST00000404484 OR1L6Q8NGR2 347 aa16.66■□□□□ 0.26
TPM1-208ENST00000404484 OR1P1Q8NH06 330 aa16.66■□□□□ 0.26
TPM1-208ENST00000404484 RBM14Q96PK6 669 aaKnown RBP16.66■□□□□ 0.26
TPM1-208ENST00000404484 RSG1Q9BU20 258 aa16.66■□□□□ 0.26
TPM1-208ENST00000404484 PARP11Q9NR21 331 aa16.66■□□□□ 0.26
TPM1-208ENST00000404484 KCNIP2Q9NS61 270 aa16.66■□□□□ 0.26
TPM1-208ENST00000404484 PITPNC1Q9UKF7 332 aa16.66■□□□□ 0.26
TPM1-208ENST00000404484 FSHBP01225 129 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 AREGP15514 252 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 CAMLGP49069 296 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 CX3CL1P78423 397 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 AKR1C1Q04828 323 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 CD69Q07108 199 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 RAB31Q13636 194 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 PVRIGQ6DKI7 326 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 CXorf58Q96LI9 332 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 SLC25A33Q9BSK2 321 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 NPCDR1Q9BY65 106 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 FBXO7Q9Y3I1 522 aa16.65■□□□□ 0.26
TPM1-208ENST00000404484 F11RQ9Y624 299 aaKnown RBP16.65■□□□□ 0.26
TPM1-208ENST00000404484 ETFRF1Q6IPR1 90 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 TREML4Q6UXN2 200 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 COMMD7Q86VX2 200 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 SLC35E1Q96K37 410 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 PLA2G2EQ9NZK7 142 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 PLXNB1O43157 2135 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 REG1AP05451 166 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 SRP14P37108 136 aaKnown RBP16.64■□□□□ 0.25
TPM1-208ENST00000404484 ARSJQ5FYB0 599 aaPredicted RBP16.64■□□□□ 0.25
TPM1-208ENST00000404484 TEPPQ6URK8 271 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 Q6ZRG5 221 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 C9orf139Q6ZV77 190 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 PIFOQ8TCI5 191 aa16.64■□□□□ 0.25
TPM1-208ENST00000404484 NUDT19A8MXV4 375 aa16.63■□□□□ 0.25
TPM1-208ENST00000404484 CYB5BO43169 146 aa16.63■□□□□ 0.25
TPM1-208ENST00000404484 MBP02144 154 aa16.63■□□□□ 0.25
TPM1-208ENST00000404484 OPRK1P41145 380 aa16.63■□□□□ 0.25
TPM1-208ENST00000404484 SLC16A13Q7RTY0 426 aa16.63■□□□□ 0.25
TPM1-208ENST00000404484 C16orf82Q7Z2V1 217 aa16.63■□□□□ 0.25
TPM1-208ENST00000404484 M0QZK8 103 aa16.62■□□□□ 0.25
TPM1-208ENST00000404484 PXDC1Q5TGL8 231 aa16.62■□□□□ 0.25
TPM1-208ENST00000404484 TMEM144Q7Z5S9 345 aa16.62■□□□□ 0.25
TPM1-208ENST00000404484 C5orf56Q8N8D9 126 aa16.62■□□□□ 0.25
TPM1-208ENST00000404484 FAM213BQ8TBF2 198 aa16.62■□□□□ 0.25
TPM1-208ENST00000404484 LSM4Q9Y4Z0 139 aaKnown RBP16.62■□□□□ 0.25
TPM1-208ENST00000404484 FBN1P35555 2871 aaKnown RBP16.61■□□□□ 0.25
TPM1-208ENST00000404484 IGHV7-81A0A0B4J1V7 117 aa16.61■□□□□ 0.25
TPM1-208ENST00000404484 NPIPB5A8MRT5 1133 aa16.61■□□□□ 0.25
TPM1-208ENST00000404484 H3BUX3 64 aa16.61■□□□□ 0.25
TPM1-208ENST00000404484 CTRB1P17538 263 aa16.61■□□□□ 0.25
TPM1-208ENST00000404484 CTRB2Q6GPI1 263 aa16.61■□□□□ 0.25
TPM1-208ENST00000404484 C22orf15Q8WYQ4 148 aa16.61■□□□□ 0.25
TPM1-208ENST00000404484 COL6A5A8TX70 2615 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 A6NDX4 124 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 APELAP0DMC3 54 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 DEFA4P12838 97 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 ZNF616Q08AN1 781 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 TMEM41BQ5BJD5 291 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 MISP3Q96FF7 219 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 RFNGQ9Y644 331 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 CRYGCP07315 174 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 GAMTQ14353 236 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 TMEM219Q86XT9 240 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 TMEM68Q96MH6 324 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 WNT10AQ9GZT5 417 aa16.6■□□□□ 0.25
TPM1-208ENST00000404484 NDPQ00604 133 aa16.59■□□□□ 0.25
TPM1-208ENST00000404484 DEFB112Q30KQ8 113 aa16.59■□□□□ 0.25
TPM1-208ENST00000404484 FFAR4Q5NUL3 377 aa16.59■□□□□ 0.25
TPM1-208ENST00000404484 IL34Q6ZMJ4 242 aa16.59■□□□□ 0.25
TPM1-208ENST00000404484 OR5R1Q8NH85 324 aa16.59■□□□□ 0.25
TPM1-208ENST00000404484 SGMS2Q8NHU3 365 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms