RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 TEX38Q6PEX7 206 aa7.13□□□□□ -1.27
VPS53-203ENST00000401468 UNQ5815/PRO19632Q6UWF5 114 aa7.13□□□□□ -1.27
VPS53-203ENST00000401468 OR1S1Q8NH92 325 aa7.13□□□□□ -1.27
VPS53-203ENST00000401468 MRAPQ8TCY5 172 aa7.13□□□□□ -1.27
VPS53-203ENST00000401468 ASB13Q8WXK3 278 aa7.13□□□□□ -1.27
VPS53-203ENST00000401468 C11orf1Q9H5F2 150 aa7.13□□□□□ -1.27
VPS53-203ENST00000401468 SLA2Q9H6Q3 261 aa7.13□□□□□ -1.27
VPS53-203ENST00000401468 AURKAIP1Q9NWT8 199 aaPredicted RBP7.13□□□□□ -1.27
VPS53-203ENST00000401468 DMRT1Q9Y5R6 373 aa7.13□□□□□ -1.27
VPS53-203ENST00000401468 F11RQ9Y624 299 aaKnown RBP7.13□□□□□ -1.27
VPS53-203ENST00000401468 WSB1Q9Y6I7 421 aa7.13□□□□□ -1.27
VPS53-203ENST00000401468 IGLV11-55A0A075B6I3 123 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 SYNGR2O43760 224 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 RBMXL2O75526 392 aaKnown RBP7.12□□□□□ -1.27
VPS53-203ENST00000401468 MED6O75586 246 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 IFNA17P01571 189 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 CXCL3P19876 107 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 MFAP2P55001 183 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 RRAS2P62070 204 aaPredicted RBP7.12□□□□□ -1.27
VPS53-203ENST00000401468 ECSCRQ19T08 205 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 GSG1LQ6UXU4 331 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 NDUFA11Q86Y39 141 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 OR11H7Q8NGC8 314 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 OR1L6Q8NGR2 347 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 OR1P1Q8NH06 330 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 CHAC2Q8WUX2 184 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 PDCD10Q9BUL8 212 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 RBKSQ9H477 322 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 PLEKHA3Q9HB20 300 aa7.12□□□□□ -1.27
VPS53-203ENST00000401468 RCL1Q9Y2P8 373 aaKnown RBP7.12□□□□□ -1.27
VPS53-203ENST00000401468 SSNA1O43805 119 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 MBPP02686 304 aaPredicted RBP7.11□□□□□ -1.27
VPS53-203ENST00000401468 PF4P02776 101 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 OR13C7P0DN81 318 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 RNASE2P10153 161 aaKnown RBP7.11□□□□□ -1.27
VPS53-203ENST00000401468 NKX2-1P43699 371 aaPredicted RBP7.11□□□□□ -1.27
VPS53-203ENST00000401468 RAB9AP51151 201 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 PAX9P55771 341 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 TAS2R30P59541 319 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 KRTAP10-11P60412 298 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 CYCSP99999 105 aaKnown RBP7.11□□□□□ -1.27
VPS53-203ENST00000401468 RUNX1Q01196 453 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 DEFB136Q30KP8 78 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 C2orf83Q53S99 150 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 ZNF491Q8N8L2 437 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 NECAP1Q8NC96 275 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 DTD1Q8TEA8 209 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 ABHD5Q8WTS1 349 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 TMEM170AQ8WVE7 144 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 SMIM8Q96KF7 97 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 P2RX4Q99571 388 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 KLK15Q9H2R5 256 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 MGAT4CQ9UBM8 478 aa7.11□□□□□ -1.27
VPS53-203ENST00000401468 WI2-2373I1.2A0A1W2PRP0 233 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 C5orf51A6NDU8 294 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 FAM223BA6NKX1 122 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 K7EPK0 472 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 GOSR2O14653 212 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 SIX6O95475 246 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 TMEM50AO95807 157 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 REG1AP05451 166 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 APELAP0DMC3 54 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 HIST1H1BP16401 226 aaKnown RBP7.1□□□□□ -1.27
VPS53-203ENST00000401468 FCGR2BP31994 310 aaPredicted RBP7.1□□□□□ -1.27
VPS53-203ENST00000401468 HTR2BP41595 481 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 CDX1P47902 265 aaPredicted RBP7.1□□□□□ -1.27
VPS53-203ENST00000401468 ERHP84090 104 aaKnown RBP7.1□□□□□ -1.27
VPS53-203ENST00000401468 FCN2Q15485 313 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 SPINK9Q5DT21 86 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 C19orf35Q6ZS72 473 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 FAM223AQ8IWN6 122 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 UXS1Q8NBZ7 420 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 OR5T1Q8NG75 326 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 OR4F17Q8NGA8 305 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 OR4X2Q8NGF9 303 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 USMG5Q96IX5 58 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 UBE2E2Q96LR5 201 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 CIB3Q96Q77 187 aaPredicted RBP7.1□□□□□ -1.27
VPS53-203ENST00000401468 OR4F4Q96R69 305 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 ATP6V0BQ99437 205 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 MED28Q9H204 178 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 ZFP57Q9NU63 452 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 U3KQ87 197 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 SORL1Q92673 2214 aa7.1□□□□□ -1.27
VPS53-203ENST00000401468 C13orf42A0A1B0GVH6 325 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 C15orf62A8K5M9 175 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 CEBPZOSA8MTT3 80 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 NUDT19A8MXV4 375 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 PRSS46E5RG02 174 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 K7EIL1 84 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 K7EIM0 57 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 DEDDO75618 318 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 GIPP09681 153 aaPredicted RBP7.09□□□□□ -1.27
VPS53-203ENST00000401468 LYL1P12980 280 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 HOXA1P49639 335 aaPredicted RBP7.09□□□□□ -1.27
VPS53-203ENST00000401468 POLR2GP62487 172 aaKnown RBP eCLIP7.09□□□□□ -1.27
VPS53-203ENST00000401468 RPL23AP62750 156 aaKnown RBP7.09□□□□□ -1.27
VPS53-203ENST00000401468 RAB32Q13637 225 aa7.09□□□□□ -1.27
VPS53-203ENST00000401468 KPRPQ5T749 579 aaPredicted RBP7.09□□□□□ -1.27
VPS53-203ENST00000401468 C11orf87Q6NUJ2 197 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms