RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 SLC25A38Q96DW6 304 aa10.55□□□□□ -0.72
VAMP1-203ENST00000400911 ELOA3CA0A087WX78 387 aaPredicted RBP10.54□□□□□ -0.72
VAMP1-203ENST00000400911 MEIS3P1A6NDR6 274 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 M0R2N4 97 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 EIF4EP06730 217 aaKnown RBP10.54□□□□□ -0.72
VAMP1-203ENST00000400911 CADM3Q8N126 398 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 CENPSQ8N2Z9 138 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 DUSP18Q8NEJ0 188 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 TSPAN14Q8NG11 270 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 PINX1Q96BK5 328 aaKnown RBP10.54□□□□□ -0.72
VAMP1-203ENST00000400911 GINS3Q9BRX5 216 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 VSIRQ9H7M9 311 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 AUNIPQ9H7T9 357 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 TMEM14BQ9NUH8 114 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 FKBP11Q9NYL4 201 aa10.54□□□□□ -0.72
VAMP1-203ENST00000400911 RTL8CO15255 209 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 GNG7O60262 68 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 MIFP14174 115 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 RFX2P48378 723 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 GABARAPL2P60520 117 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 PVRIGQ6DKI7 326 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 DHRS11Q6UWP2 260 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 BORCS5Q969J3 196 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 RNF126Q9BV68 326 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 EHFQ9NZC4 300 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 RABAC1Q9UI14 185 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 X6R8D5 127 aa10.53□□□□□ -0.72
VAMP1-203ENST00000400911 ZNF705EA8MWA4 302 aaPredicted RBP10.52□□□□□ -0.73
VAMP1-203ENST00000400911 CLEC2LP0C7M8 214 aa10.52□□□□□ -0.73
VAMP1-203ENST00000400911 SDC2P34741 201 aa10.52□□□□□ -0.73
VAMP1-203ENST00000400911 MXD1Q05195 221 aa10.52□□□□□ -0.73
VAMP1-203ENST00000400911 KCTD21Q4G0X4 260 aa10.52□□□□□ -0.73
VAMP1-203ENST00000400911 ZNF767PQ75MW2 155 aa10.52□□□□□ -0.73
VAMP1-203ENST00000400911 TRPT1Q86TN4 253 aaKnown RBP10.52□□□□□ -0.73
VAMP1-203ENST00000400911 POM121L12Q8N7R1 296 aa10.52□□□□□ -0.73
VAMP1-203ENST00000400911 MOB3AQ96BX8 217 aa10.52□□□□□ -0.73
VAMP1-203ENST00000400911 ZNF2Q9BSG1 426 aaPredicted RBP10.52□□□□□ -0.73
VAMP1-203ENST00000400911 VCX3AQ9NNX9 186 aa10.52□□□□□ -0.73
VAMP1-203ENST00000400911 CLEC5AQ9NY25 188 aa10.52□□□□□ -0.73
VAMP1-203ENST00000400911 HSPG2P98160 4391 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 A0A0A6YYH2 397 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 TRAV2A0A0B4J234 112 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 A6NJ64 397 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 KNCNA6PVL3 124 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 C4BPBP20851 252 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 PSMB9P28065 219 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 CBX5P45973 191 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 C12orf74Q32Q52 190 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 IDNKQ5T6J7 187 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 UBE2UQ5VVX9 321 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 CMTM1Q8IZ96 169 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 TSC22D3Q99576 134 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 KRTAP4-5Q9BYR2 181 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 DIABLOQ9NR28 239 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 SSR3Q9UNL2 185 aa10.51□□□□□ -0.73
VAMP1-203ENST00000400911 PUS1Q9Y606 427 aaKnown RBP eCLIP10.51□□□□□ -0.73
VAMP1-203ENST00000400911 A0A087WXM4 84 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 DEFB131BA0A096LNP1 70 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 PMP2P02689 132 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 P0DMU3 169 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 FAM231AP0DMU4 169 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 FAM231CP0DMU5 169 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 SPP1P10451 314 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 SCAND1P57086 179 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 TMEM41BQ5BJD5 291 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 MORN3Q6PF18 240 aaPredicted RBP10.5□□□□□ -0.73
VAMP1-203ENST00000400911 ZNF114Q8NC26 417 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 OR4A16Q8NH70 328 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 SCRT1Q9BWW7 348 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 RNF167Q9H6Y7 350 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 ZFAND3Q9H8U3 227 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 IFT46Q9NQC8 304 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 TBC1D24Q9ULP9 559 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 CELA1Q9UNI1 258 aa10.5□□□□□ -0.73
VAMP1-203ENST00000400911 A0A1B0GU03 582 aa10.49□□□□□ -0.73
VAMP1-203ENST00000400911 GPR31O00270 319 aa10.49□□□□□ -0.73
VAMP1-203ENST00000400911 AMBPP02760 352 aa10.49□□□□□ -0.73
VAMP1-203ENST00000400911 PRCDQ00LT1 54 aa10.49□□□□□ -0.73
VAMP1-203ENST00000400911 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
VAMP1-203ENST00000400911 ZNF600Q6ZNG1 722 aa10.49□□□□□ -0.73
VAMP1-203ENST00000400911 CSNK1G2-AS1Q8NCQ2 148 aa10.49□□□□□ -0.73
VAMP1-203ENST00000400911 STXBP6Q8NFX7 210 aa10.49□□□□□ -0.73
VAMP1-203ENST00000400911 TMEM231Q9H6L2 316 aa10.49□□□□□ -0.73
VAMP1-203ENST00000400911 K7EQG2 157 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 TMEM50AO95807 157 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 ZNF688P0C7X2 276 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 NPPCP23582 126 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 NPBWR1P48145 328 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 HSPE1P61604 102 aaKnown RBP10.48□□□□□ -0.73
VAMP1-203ENST00000400911 ERHP84090 104 aaKnown RBP10.48□□□□□ -0.73
VAMP1-203ENST00000400911 PHLDA2Q53GA4 152 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 SPINK9Q5DT21 86 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 H2BFWTQ7Z2G1 175 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 SPARTQ8N0X7 666 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 FCGR1BQ92637 280 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 SEC22AQ96IW7 307 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 NDUFAF3Q9BU61 184 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 FXYD6Q9H0Q3 95 aa10.48□□□□□ -0.73
VAMP1-203ENST00000400911 A0A1W2PS18 150 aa10.47□□□□□ -0.73
VAMP1-203ENST00000400911 IGKV1-39P01597 117 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms