RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 DEFB125Q8N687 156 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 FAM169BQ8N8A8 192 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 NUP35Q8NFH5 326 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 OR2Z1Q8NG97 314 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 MS4A6AQ9H2W1 248 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 TP73-AS1Q9UF72 201 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 CHTOPQ9Y3Y2 248 aaKnown RBP7.77□□□□□ -1.17
COL28A1-201ENST00000399429 PEX7O00628 323 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 LINC01565O15544 149 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 RBP4P02753 201 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 IGHV4-34P06331 123 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 CACNG7P62955 275 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 RPL39P5Q59GN2 51 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 MGST2Q99735 147 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 CHODLQ9H9P2 273 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 DENND4CQ5VZ89 1909 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 TICRRQ7Z2Z1 1910 aa7.77□□□□□ -1.17
COL28A1-201ENST00000399429 KIAA1671Q9BY89 1806 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 KIF26AQ9ULI4 1882 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-201ENST00000399429 FOXI3A8MTJ6 420 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-201ENST00000399429 CLEC3BP05452 202 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 PRB4P10163 310 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-201ENST00000399429 CKS2P33552 79 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 ATP6V0BQ99437 205 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 PRDM14Q9GZV8 571 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 DEFB127Q9H1M4 99 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 KBTBD11-OT1A0A1B0GTJ5 212 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 TAX1BP3O14907 124 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 NTF4P34130 210 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 FXYD7P58549 80 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 C3AR1Q16581 482 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 EBLN2Q6P2I7 272 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 ADAMTSL5Q6ZMM2 481 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 ZADH2Q8N4Q0 377 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 OR10X1Q8NGY0 326 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 ANAPC13Q9BS18 74 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 TMUB1Q9BVT8 246 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 V9GYV3 84 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 POLEQ07864 2286 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 CACNA1GO43497 2377 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 WNT9BO14905 357 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 WNT2P09544 360 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 OR9G9P0C7N8 305 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 PYYP10082 97 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 EP300Q09472 2414 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-201ENST00000399429 NABP1Q96AH0 204 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 DCTN5Q9BTE1 182 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 PRNDQ9UKY0 176 aa7.76□□□□□ -1.17
COL28A1-201ENST00000399429 TRBV20OR9-2A0A075B6H5 130 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 K7EN84 100 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 CRYGSP22914 178 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 MEF2CQ06413 473 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-201ENST00000399429 TTC32Q5I0X7 151 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 RAB1CQ92928 201 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 CRISPLD2Q9H0B8 497 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 CACNA1EQ15878 2313 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 NCOA6Q14686 2063 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-201ENST00000399429 ZNF716A6NP11 495 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 YPEL1O60688 119 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 LYZL6O75951 148 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 TNFSF15O95150 251 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 EFEMP2O95967 443 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 PSMB2P49721 201 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 RBPJQ06330 500 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 VWC2Q2TAL6 325 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-201ENST00000399429 SPACA3Q8IXA5 215 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 SARAFQ96BY9 339 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 YPEL2Q96QA6 119 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 REPIN1Q9BWE0 567 aaKnown RBP7.75□□□□□ -1.17
COL28A1-201ENST00000399429 GEMIN7Q9H840 131 aaKnown RBP7.75□□□□□ -1.17
COL28A1-201ENST00000399429 TRAV5A0A0B4J249 113 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 TFF1P04155 84 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 PAX1P15863 534 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 KIR2DS2P43631 304 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 ETDBQ3ZM63 59 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 RPP21Q9H633 154 aaKnown RBP7.75□□□□□ -1.17
COL28A1-201ENST00000399429 SPTAN1Q13813 2472 aaKnown RBP7.75□□□□□ -1.17
COL28A1-201ENST00000399429 BCL6BQ8N143 479 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-201ENST00000399429 DNASE2BQ8WZ79 361 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 CHRNA10Q9GZZ6 450 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 TMEM160Q9NX00 188 aa7.75□□□□□ -1.17
COL28A1-201ENST00000399429 ZNF106Q9H2Y7 1883 aaKnown RBP7.75□□□□□ -1.17
COL28A1-201ENST00000399429 LOC102723996A0A087X1L8 192 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 C9orf118A6NHY6 69 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 C15orf62A8K5M9 175 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 TGFAP01135 160 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 ZNF718Q3SXZ3 478 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 STXBP6Q8NFX7 210 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 OR4A5Q8NH83 315 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 NPIPB3Q92617 1050 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 CHCHD1Q96BP2 118 aaKnown RBP7.74□□□□□ -1.17
COL28A1-201ENST00000399429 IGHV3OR15-7A0A075B7D8 119 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 TIAF1O95411 115 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 RPL7P18124 248 aaKnown RBP7.74□□□□□ -1.17
COL28A1-201ENST00000399429 CXCL12P48061 93 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 ZNF766Q5HY98 468 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 OR4X2Q8NGF9 303 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 ZNF479Q96JC4 524 aa7.74□□□□□ -1.17
COL28A1-201ENST00000399429 WDR90Q96KV7 1748 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms