RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 RTBDNQ9BSG5 229 aaPredicted RBP11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 CEPT1Q9Y6K0 416 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 DNAH7Q8WXX0 4024 aa11.17□□□□□ -0.62
SMIM11A-203ENST00000399299 K7EMT4 169 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 ST8SIA3O43173 380 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 CTSGP08311 255 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 TNFSF8P32971 234 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 MFAP4P55083 255 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 SLC35G3Q8N808 338 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 MCFD2Q8NI22 146 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 MUC7Q8TAX7 377 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 GLYATL2Q8WU03 294 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 MISP3Q96FF7 219 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 PDCD10Q9BUL8 212 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 C5orf66Q9H5L9 145 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 NAA60Q9H7X0 242 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 GPR132Q9UNW8 380 aa11.16□□□□□ -0.62
SMIM11A-203ENST00000399299 FABP12A6NFH5 140 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 C15orf62A8K5M9 175 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 NUPL2O15504 423 aaKnown RBP11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 SCAF4O95104 1147 aaKnown RBP11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 MT-CO2P00403 227 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 IFNA17P01571 189 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 OR5AC1P0C628 307 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 DHODHQ02127 395 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 RELQ04864 619 aaPredicted RBP11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 AARDQ4LEZ3 155 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 RBPMS2Q6ZRY4 209 aaKnown RBP11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 DEFB125Q8N687 156 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 OR51S1Q8NGJ8 323 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 OR52B4Q8NGK2 314 aa11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 RBPMSQ93062 196 aaKnown RBP11.15□□□□□ -0.62
SMIM11A-203ENST00000399299 A0A0G2JRQ6 117 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 TEX13DA0A0J9YY54 714 aaPredicted RBP11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 CRYM-AS1A6NIL9 109 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 SNCAP37840 140 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 SUB1P53999 127 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 SPINK9Q5DT21 86 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 RNASE11Q8TAA1 199 aaKnown RBP11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 ZNF414Q96IQ9 312 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 SCGB3A2Q96PL1 93 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 WFDC10AQ9H1F0 79 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 SRD5A3Q9H8P0 318 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 EDA2RQ9HAV5 297 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 SCP2D1Q9UJQ7 156 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 SELENOKQ9Y6D0 94 aa11.14□□□□□ -0.63
SMIM11A-203ENST00000399299 RBMY1BA6NDE4 496 aaKnown RBP11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 RBMY1EA6NEQ0 496 aaKnown RBP11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 CORTO00230 105 aa11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 TSPAN4O14817 238 aa11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 RBMY1DP0C7P1 496 aaKnown RBP11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 LAMTOR1Q6IAA8 161 aa11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 OR52E5Q8NH55 327 aa11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 LHFPL5Q8TAF8 219 aa11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 PINX1Q96BK5 328 aaKnown RBP11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 GALNT14Q96FL9 552 aa11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 OR10C1Q96KK4 312 aa11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 C20orf24Q9BUV8 137 aa11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 HIPK2Q9H2X6 1198 aa11.13□□□□□ -0.63
SMIM11A-203ENST00000399299 GNG7O60262 68 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 RNASE2P10153 161 aaKnown RBP11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 ETV6P41212 452 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 NPBWR1P48145 328 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 HOXA1P49639 335 aaPredicted RBP11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 SPCS3P61009 180 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 BSXQ3C1V8 233 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 Q6ZRM9 215 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 SELENOHQ8IZQ5 122 aaKnown RBP11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 IL22RA2Q969J5 263 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 ENY2Q9NPA8 101 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 SMPXQ9UHP9 88 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 TMEM56-RWDD3S4R434 201 aa11.12□□□□□ -0.63
SMIM11A-203ENST00000399299 CASC10Q5T4H9 136 aa11.11□□□□□ -0.63
SMIM11A-203ENST00000399299 TMEM268Q5VZI3 342 aa11.11□□□□□ -0.63
SMIM11A-203ENST00000399299 DUSP18Q8NEJ0 188 aa11.11□□□□□ -0.63
SMIM11A-203ENST00000399299 TRIM63Q969Q1 353 aa11.11□□□□□ -0.63
SMIM11A-203ENST00000399299 TMEM230Q96A57 120 aa11.11□□□□□ -0.63
SMIM11A-203ENST00000399299 RBM38Q9H0Z9 239 aaKnown RBP11.11□□□□□ -0.63
SMIM11A-203ENST00000399299 CACFD1Q9UGQ2 172 aa11.11□□□□□ -0.63
SMIM11A-203ENST00000399299 KCNIP3Q9Y2W7 256 aa11.11□□□□□ -0.63
SMIM11A-203ENST00000399299 TENM2Q9NT68 2774 aa11.11□□□□□ -0.63
SMIM11A-203ENST00000399299 IGHV3OR16-8A0A075B7F1 116 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 IGHV7-4-1A0A0J9YVY3 117 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 CCDC160A6NGH7 325 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 ZNF701M0R085 212 aaPredicted RBP11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 IGHV3-48P01763 117 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 FAUP35544 74 aaKnown RBP11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 AP3S2P59780 193 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 TMEM187Q14656 261 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 DEDD2Q8WXF8 326 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 GPR146Q96CH1 333 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 FAM110AQ9BQ89 295 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 GINS3Q9BRX5 216 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 MCUBQ9NWR8 336 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 CACNG5Q9UF02 275 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 V9GYH0 126 aa11.1□□□□□ -0.63
SMIM11A-203ENST00000399299 CSMD3Q7Z407 3707 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms