RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 PLXNA2O75051 1894 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 CD55P08174 381 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 PRSS8Q16651 343 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 WDR82Q6UXN9 313 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 OR10S1Q8NGN2 331 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 CLDND2Q8NHS1 167 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 WNT10AQ9GZT5 417 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 SLC17A3O00476 420 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 UBE2L6O14933 153 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 CIDEAO60543 219 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 UCP1P25874 307 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 ZIC4Q8N9L1 334 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 KCNS1Q96KK3 526 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 ZNF106Q9H2Y7 1883 aaKnown RBP9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 ELOA3CA0A087WX78 387 aaPredicted RBP9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 LEPROTL1O95214 131 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 CENPWQ5EE01 88 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 C5orf24Q7Z6I8 188 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 PAQR4Q8N4S7 273 aaPredicted RBP9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 LYZL4Q96KX0 146 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 PLXND1Q9Y4D7 1925 aa9.65□□□□□ -0.86
PCDHGA8-201ENST00000398604 IGHV1-18A0A0C4DH31 117 aa9.65□□□□□ -0.87
PCDHGA8-201ENST00000398604 A8MXK9 166 aa9.65□□□□□ -0.87
PCDHGA8-201ENST00000398604 CEACAM4O75871 244 aa9.65□□□□□ -0.87
PCDHGA8-201ENST00000398604 AREGP15514 252 aa9.65□□□□□ -0.87
PCDHGA8-201ENST00000398604 WFDC12Q8WWY7 111 aa9.65□□□□□ -0.87
PCDHGA8-201ENST00000398604 GPR82Q96P67 336 aa9.65□□□□□ -0.87
PCDHGA8-201ENST00000398604 TRAV14DV4A0A0A6YYC5 116 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 IQCF6A8MYZ5 107 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 CYP2G1PQ6ZSU1 146 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 LHFPL4Q7Z7J7 247 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 SYT8Q8NBV8 401 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 ZNF418Q8TF45 676 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 SMIM12Q96EX1 92 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 C18orf15Q96N68 181 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 TRAV40A0A0B4J280 105 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 LOC107984156A0A0G2JMH3 177 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 CBLN1P23435 193 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 HERPUD1Q15011 391 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 ARL17AQ8IVW1 177 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 TRBV20OR9-2A0A075B6H5 130 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 IGKV1D-8A0A087WSZ0 117 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 GCGP01275 180 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 DANCRP0C864 163 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 SRD5A1P18405 259 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 DLX6P56179 175 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 C10orf55Q5SWW7 151 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 TEX29Q8N6K0 151 aa9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 RTBDNQ9BSG5 229 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA8-201ENST00000398604 PQLC2LA1A4F0 135 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 CD8AP01732 235 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 SAA1P0DJI8 122 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 ARPC1AQ92747 370 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 TM2D1Q9BX74 207 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 SAA2-SAA4A0A096LPE2 208 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 E9PLN8 166 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 SAA2P0DJI9 122 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 GNLYP22749 145 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 VKORC1Q9BQB6 163 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 NPCDR1Q9BY65 106 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 LINC00312Q9Y6C7 94 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 C5orf63A6NC05 138 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 RAMP3O60896 148 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 TXNDC17Q9BRA2 123 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 SMDT1Q9H4I9 107 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 SIAH2O43255 324 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 Q0VFX4 171 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 TMEM219Q86XT9 240 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 RAB37Q96AX2 223 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 TICRRQ7Z2Z1 1910 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 CDH23Q9H251 3354 aa9.63□□□□□ -0.87
PCDHGA8-201ENST00000398604 RNF222A6NCQ9 220 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 GGCTO75223 188 aaKnown RBP9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 HLA-DQA1P01909 254 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 CD33P20138 364 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 TBR1Q16650 682 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 COLCA1Q6ZS62 124 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 GALNT14Q96FL9 552 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 KIAA1671Q9BY89 1806 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 IGKV1-12A0A0C4DH73 117 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 RBFOX2O43251 390 aaKnown RBP eCLIP9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 IGKV1D-12P01611 117 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 LY6G6FQ5SQ64 297 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 BIVMQ86UB2 503 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 OR4X2Q8NGF9 303 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 SLC25A28Q96A46 364 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 TM4SF5O14894 197 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 TIMM23O14925 209 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 IGHV1-46P01743 117 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 TSPOP30536 169 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 ZNF672Q499Z4 452 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 CBLN4Q9NTU7 201 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 ZFP30Q9Y2G7 519 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 F11RQ9Y624 299 aaKnown RBP9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 TLN1Q9Y490 2541 aaKnown RBP9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 A0A0G2JLM5 398 aa9.62□□□□□ -0.87
PCDHGA8-201ENST00000398604 ATP5G3P48201 142 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms