RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 FXYD3Q14802 87 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 LBHQ53QV2 105 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 KRTCAP3Q53RY4 240 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 STUMQ69YW2 141 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 AMMECR1LQ6DCA0 310 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 MRPL54Q6P161 138 aaKnown RBP4.11□□□□□ -1.75
SMAD4-202ENST00000398417 TRAT1Q6PIZ9 186 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 SIGMAR1Q99720 223 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 WDR83OSQ9Y284 106 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 OR51B2Q9Y5P1 312 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 ABCA2Q9BZC7 2435 aa4.11□□□□□ -1.75
SMAD4-202ENST00000398417 SNURFLB1AK76 121 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 OR7C2O60412 319 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 PLAUP00749 431 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 TGFAP01135 160 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 AMTP48728 403 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 PRR4Q16378 134 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 PYY3Q5JQD4 70 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 CYP2G1PQ6ZSU1 146 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 TMEM18Q96B42 140 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 C16orf92Q96LL3 132 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 SCRT1Q9BWW7 348 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 MANBALQ9NQG1 85 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 THYN1Q9P016 225 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 NLRC5Q86WI3 1866 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 A0A087WWC5 75 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 TRBV6-6A0A0A6YYG2 114 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 K7ERS5 55 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 ADH4P08319 380 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 OR4A8P0C604 315 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 GCHFRP30047 84 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 ERVK11-1P61568 191 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST3H2BBQ8N257 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 RPP25LQ8N5L8 163 aaKnown RBP4.1□□□□□ -1.75
SMAD4-202ENST00000398417 IFNL4K9M1U5 179 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 NDUFB3O43676 98 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 IGFBP2P18065 325 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 SPCS3P61009 180 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 MLANAQ16655 118 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 OR10G8Q8NGN5 311 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 H3BTX0 84 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 PRB4P10163 310 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-202ENST00000398417 IER3P46695 156 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 CSN1S1P47710 185 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 CCL8P80075 99 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 RPRMLQ8N4K4 120 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 TBX15Q96SF7 602 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 ALKBH7Q9BT30 221 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-202ENST00000398417 WT1P19544 449 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-202ENST00000398417 DAZAP2Q15038 168 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-202ENST00000398417 SPRNQ5BIV9 151 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 CCL17Q92583 94 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 GP6Q9HCN6 339 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 FKBP11Q9NYL4 201 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 USF3Q68DE3 2245 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 GRIFINA4D1Z8 144 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 TYMSP04818 313 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 IL3RAP26951 378 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 MEF2BQ02080 365 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-202ENST00000398417 PARD6AQ9NPB6 346 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 ADAMTS9Q9P2N4 1935 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 COX7A2P2O60397 106 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST1H2BKO60814 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST1H2BJP06899 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST1H2BOP23527 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST1H2BBP33778 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST1H2BDP58876 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST1H2BCP62807 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 PRB3Q04118 309 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST2H2BEQ16778 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-202ENST00000398417 TMEM14EPQ6UXP3 125 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 ZCCHC24Q8N2G6 241 aaKnown RBP4.1□□□□□ -1.75
SMAD4-202ENST00000398417 GCSAMQ8N6F7 178 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 OR5AU1Q8NGC0 362 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST1H2BHQ93079 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST1H2BNQ99877 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 HIST1H2BMQ99879 126 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 DERL1Q9BUN8 251 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 SPRY4Q9C004 299 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 CST9LQ9H4G1 147 aa4.1□□□□□ -1.75
SMAD4-202ENST00000398417 EREGO14944 169 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 HRASP01112 189 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF883P0CG24 379 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 GYPEP15421 78 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 TIGITQ495A1 244 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 TRANK1O15050 2925 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 MARCH11A6NNE9 402 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 PRR33A8MZF0 331 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 REG1AP05451 166 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 KRTDAPP60985 99 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 HSPE1P61604 102 aaKnown RBP4.09□□□□□ -1.75
SMAD4-202ENST00000398417 RTL8BQ17RB0 113 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 Q6ZT83 130 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 MS4A10Q96PG2 267 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 ZNRD1Q9P1U0 126 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 TIMM9Q9Y5J7 89 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 ZDBF2Q9HCK1 2354 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF462Q96JM2 2506 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 IGHV2-5P01817 119 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms